ViewVC Help
View Directory | Revision Log | Download Tarball | View Changeset | Root Listing
root/owl/trunk/src/owl/core
r1248
File Last Change
 ../
sequence/ 1172 (9 years ago) by jmduarteg: Now using apache commons logging
util/ 1208 (9 years ago) by cvehlow: Scoring:KendallsTau-method added to Statistics
features/ 1226 (9 years ago) by hstehr: Refactoring of SiftsConnection and SiftsFeature, now implementing Uniprot2Pdb
connections/ 1234 (9 years ago) by hstehr: New method to get PDB cross refs for a Uniprot entry
runners/ 1242 (9 years ago) by jmduarteg: Fixed bug: NACCESS (weirdly) calculates slightly different ASA values for same molecule in different orientation (i.e. it depends on the choice of axes)!! That produces then some strange BSA values (including some negative) and slight discrepancies. Thus now we run NACCESS always for each of the 2 isolated molecules of the interface and then the complex (and so losing efficiency).
structure/ 1248 (9 years ago) by jmduarteg: Now using our own ASA calculation instead of NACCESS for the interface areas calculation. We are slower than NACCESS but at least don't depend on it anymore, old NACCESS methods can still be used.
         0 files shown