ViewVC Help
View Directory | Revision Log | Download Tarball | View Changeset | Root Listing
root/owl/trunk/src/owl/core/connections
r1265
File Last Change (rev)
 ../
pisa/ 1265 (10 years ago) by jmduarteg: Now keeping track of ASA calc method
UniProtConnection.java 1234 (10 years ago) by hstehr: New method to get PDB cross refs for a Uniprot entry
UniProtPdbRef.java 1234 (10 years ago) by hstehr: New method to get PDB cross refs for a Uniprot entry
PhosphoSiteConnection.java 1231 (10 years ago) by hstehr: Adding class PhosphoSiteConnection
SiftsConnection.java 1226 (10 years ago) by hstehr: Refactoring of SiftsConnection and SiftsFeature, now implementing Uniprot2Pdb
EmblWSDBfetchConnection.java 1172 (10 years ago) by jmduarteg: Now using apache commons logging
JPredConnection.java 1062 (10 years ago) by stehr: fixed a minor bug in JPredConnection; new method SecondaryStructure.getConsensusSecondaryStructure(); changed visibility of RIGEnsemble.addFile() to public
JPredStopNotifier.java 1060 (10 years ago) by hstehr: New helper classes JPredProgressRetriever and JPredNotifier which can be used to run JPredConnection in a thread and notify some GUI component of the progress.
JPredProgressRetriever.java 1060 (10 years ago) by hstehr: New helper classes JPredProgressRetriever and JPredNotifier which can be used to run JPredConnection in a thread and notify some GUI component of the progress.
NoMatchFoundException.java 1040 (11 years ago) by jmduarteg: New UniprotConnection taken from Henning's structural impact project (lots of new jar dependencies with that). New EmblWSDBFetchConnection class to get sequences from EMBL web services.
ECConnection.java 1035 (11 years ago) by jmduarteg: Extracted the EC data parsing code to its own connection class.
ScopConnection.java 1034 (11 years ago) by jmduarteg: Extracted Scop parsing code to its own connection class.
CSAConnection.java 1034 (11 years ago) by jmduarteg: Extracted Scop parsing code to its own connection class.
GTGParser.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
GTGHitList.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PrositeHit.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
GTGHit.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PrositeScanner.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
ConsurfConnection.java 1005 (11 years ago) by hstehr: refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
package-info.java 1005 (11 years ago) by hstehr: refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
PDomainsConnection.java 1005 (11 years ago) by hstehr: refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
         20 files shown