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root/owl/trunk/src/owl/core/runners
r1117
File (rev) Last Change
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tinker/ 1057 (10 years ago) by matt4077: add psi/phi constraints from secondary structure to tinker reconstructions
gromacs/ 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
blast/ 1106 (10 years ago) by jmduarteg: Implemented caching of blast in UniprotHomologList
TcoffeeRunner.java 1097 (10 years ago) by jmduarteg: Now explicitely specifying output dnd file in tcoffee so it can be removed by the calling program.
TcoffeeError.java 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PsipredRunner.java 1046 (10 years ago) by hstehr: JPredConnection now returns a SecondaryStructure object; some updated javadocs
PsipredError.java 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PolyposeRunner.java 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
NaccessRunner.java 1005 (10 years ago) by hstehr: refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
MaxClusterRunner.java 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
DsspRunner.java 1046 (10 years ago) by hstehr: JPredConnection now returns a SecondaryStructure object; some updated javadocs
DaliRunner.java 1009 (10 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
CalcSurfVolRunner.java 1032 (10 years ago) by jmduarteg: Extracted the calc-vol and calc-surf runner code to its own Runner class.
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