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Revision 1195 - Directory Listing
Modified Thu Aug 19 09:56:51 2010 UTC (9 years, 10 months ago) by cvehlow
classes moved
Revision 1181 - Directory Listing
Modified Tue Aug 10 15:51:11 2010 UTC (9 years, 11 months ago) by jmduarteg
Now parsing the unit cell and crystal space group info when reading PDB sources. New simple script for unit cell volume.
Revision 1176 - Directory Listing
Modified Fri Aug 6 10:03:26 2010 UTC (9 years, 11 months ago) by jmduarteg
Now parsing the occupancy and bfactors from pdbfile, ciffile or pdbase. Tests passed (improved tests so that they can run straight from an pdb ftp mirror with gz files).
Revision 1042 - Directory Listing
Modified Wed Apr 21 16:11:08 2010 UTC (10 years, 2 months ago) by jmduarteg
New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
Revision 1030 - Directory Listing
Modified Mon Apr 19 09:39:07 2010 UTC (10 years, 2 months ago) by jmduarteg
Extracted constants to owl_test_paths.dat and added CASP7 fasta files to resources dir. Now BlastParsersTest should be able to run anywhere.
Revision 1029 - Directory Listing
Modified Mon Apr 19 09:01:51 2010 UTC (10 years, 2 months ago) by jmduarteg
Fixed hard-coded resources paths broken since major restructuring of project.
Revision 1009 - Directory Listing
Modified Wed Mar 31 15:50:04 2010 UTC (10 years, 3 months ago) by hstehr
refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
Revision 1008 - Directory Listing
Added Wed Mar 31 14:03:27 2010 UTC (10 years, 3 months ago) by hstehr
refactoring: adapting test packages to match new package structure