Revision 1326 - Directory Listing
Modified Thu Mar 3 13:21:18 2011 UTC (10 years, 1 month ago) by jmduarteg

Renamed xxxxError classes to xxxxException as they should be.

Revision 1313 - Directory Listing
Modified Wed Feb 9 10:28:56 2011 UTC (10 years, 2 months ago) by jmduarteg

Now taking paths from owl_test_paths.dat file

Revision 1305 - Directory Listing
Modified Fri Jan 21 10:11:16 2011 UTC (10 years, 3 months ago) by jmduarteg

Renaming all xxxxError named exceptions to xxxxException. Long overdue thing (was historical because it came from python). Learnt just recently that java does have a concept of Error too.

Revision 1304 - Directory Listing
Modified Sun Jan 16 16:06:09 2011 UTC (10 years, 3 months ago) by jmduarteg

Fixed important bug: we didn't model the blast data properly. A hit is composed of several hsps. Now our classes following that data model properly (before we treated a hit as an hsp).

Revision 1030 - Directory Listing
Modified Mon Apr 19 09:39:07 2010 UTC (11 years ago) by jmduarteg

Extracted constants to owl_test_paths.dat and added CASP7 fasta files to resources dir. Now BlastParsersTest should be able to run anywhere.

Revision 1009 - Directory Listing
Modified Wed Mar 31 15:50:04 2010 UTC (11 years ago) by hstehr

refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features

Revision 1008 - Directory Listing
Added Wed Mar 31 14:03:27 2010 UTC (11 years ago) by hstehr

refactoring: adapting test packages to match new package structure