ViewVC Help
View Directory | Revision Log | Download Tarball | View Changeset | Root Listing
root/owl/trunk/tools
r115
File Last Change
 ../
R.java 14 (13 years ago) by stehr: removed ununsed imports and variables
mySQLConnect.java 14 (13 years ago) by stehr: removed ununsed imports and variables
calcMST.java 14 (13 years ago) by stehr: removed ununsed imports and variables
Report.java 14 (13 years ago) by stehr: removed ununsed imports and variables
MultiOutputStream.java 27 (13 years ago) by stehr: initial import
MultiOutputStreamTest.java 27 (13 years ago) by stehr: initial import
PymolServerOutputStream.java 28 (13 years ago) by stehr: prevent overlong commands from being sent to the server
PymolServerOutputStreamTest.java 29 (13 years ago) by stehr: changed server port to standard
utils4lh.java 30 (13 years ago) by stehr: introduced generics, so class will compile in Java 5, not sure though whether the functionality is the same as before, will need more testing
Machine.java 45 (13 years ago) by filippis: Graph2Pymol class now functional testGraph2Pymol class now functional with comments also PyMol class:python strings methods and removeList, concatList, refresh methods added Machine class: indentation
PyMol.java 48 (13 years ago) by filippis: Refresh method added plus refresh added before saving image
Graph2Pml.java 49 (13 years ago) by filippis: More flexibility in coloring, popDefaults/setDefaults methods plus comments
ColoredStrings.java 54 (13 years ago) by stehr: initial import
ColoredStringsTest.java 54 (13 years ago) by stehr: initial import
utils4DB.java 56 (13 years ago) by filippis: execUpdateQuery method added and code in comments was removed
ClusterConnection.java 95 (13 years ago) by duarte: Adapted also ClusterConnection and checking methods in DataDistribution to text/numeric keys. Some methods in ClusterConnection have not changed at all even though they deal with keys. I haven't changed them because they are applicable only to numeric keys: insertIdxInMaster, getLastInsertId and getIdxSet
QueryThread.java 97 (13 years ago) by duarte: Added getters/setters to host,db,user and password in MySQLConnection Added another constructor to QueryThread to take just the MySQLConnection as argument
TableSorter.java 98 (13 years ago) by stehr: Added class TableSorter to tools package
SystemCmd.java 108 (13 years ago) by duarte: Added functionality to run commands in different threads
MySQLConnection.java 109 (13 years ago) by duarte: Made loadMySQLDriver method public (needed to call it from other class) and static (makes more sense)
MySQLConnectionCheck.java 110 (13 years ago) by duarte: New class MySQLConnectionCheck, to check whether MySQL servers are alive, uses threads Changes in DataDistribution: - new field: String[] nodes, initialised in constructor - changed constructor to check for nodes that are alive, using new method nodesAlive - renamed getNodes to getMySQLNodes. New method getNodes just returns the new field String[] nodes DataDistributer: renamed calls to DataDistribution's getNodes to getMySQLNodes
DataDistributer.java 110 (13 years ago) by duarte: New class MySQLConnectionCheck, to check whether MySQL servers are alive, uses threads Changes in DataDistribution: - new field: String[] nodes, initialised in constructor - changed constructor to check for nodes that are alive, using new method nodesAlive - renamed getNodes to getMySQLNodes. New method getNodes just returns the new field String[] nodes DataDistributer: renamed calls to DataDistribution's getNodes to getMySQLNodes
DataDistribution.java 113 (13 years ago) by duarte: Modified method getIdFromMaster to create keyTable if it didn't exist
Msdsd2Pdb.java 115 (12 years ago) by duarte: Adapted to msdsd_00_07_a Now uses MySQLConnection and PrintWriters and not mysql client through shell (got rid of that method) Thus all methos taking new arguments user and pdbFile New methods: export2file taking accession_code, chain_pdb_code export2file taking chain_id, model_id
(Current path doesn't exist after revision 950)
         24 files shown