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r94
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R.java 14 (13 years ago) by stehr: removed ununsed imports and variables
mySQLConnect.java 14 (13 years ago) by stehr: removed ununsed imports and variables
calcMST.java 14 (13 years ago) by stehr: removed ununsed imports and variables
Report.java 14 (13 years ago) by stehr: removed ununsed imports and variables
MultiOutputStream.java 27 (13 years ago) by stehr: initial import
MultiOutputStreamTest.java 27 (13 years ago) by stehr: initial import
PymolServerOutputStream.java 28 (13 years ago) by stehr: prevent overlong commands from being sent to the server
PymolServerOutputStreamTest.java 29 (13 years ago) by stehr: changed server port to standard
utils4lh.java 30 (13 years ago) by stehr: introduced generics, so class will compile in Java 5, not sure though whether the functionality is the same as before, will need more testing
SystemCmd.java 39 (13 years ago) by filippis: Adding comments
Msdsd2Pdb.java 40 (13 years ago) by filippis: Adding Msdsd2Pdb and PyMol classes
Machine.java 45 (13 years ago) by filippis: Graph2Pymol class now functional testGraph2Pymol class now functional with comments also PyMol class:python strings methods and removeList, concatList, refresh methods added Machine class: indentation
PyMol.java 48 (13 years ago) by filippis: Refresh method added plus refresh added before saving image
Graph2Pml.java 49 (13 years ago) by filippis: More flexibility in coloring, popDefaults/setDefaults methods plus comments
ColoredStrings.java 54 (13 years ago) by stehr: initial import
ColoredStringsTest.java 54 (13 years ago) by stehr: initial import
utils4DB.java 56 (13 years ago) by filippis: execUpdateQuery method added and code in comments was removed
QueryThread.java 86 (13 years ago) by duarte: Added PARALLELISM in load/dump of tables using new class QueryThread (extends Thread) Modified methods loadData, dumpData and loadSplitData to dump/load parallely in cases that is useful by using the QueryThread class. New method initializeDirs(String[]) to do some of the dir initialization that was in dumpData Got rid of one of the getConnectionToNode method, not needed anymore New important 2 final static variables: NUM_CONCURRENT_READ_QUERIES and NUM_CONCURRENT_WRITE_QUERIES. They define how much concurrency we want in reads/writes to nfs for loads/dumps
ClusterConnection.java 92 (13 years ago) by duarte: Made KEYMASTERDB in DataDistribution public. Now using in all other classes/programs that need KEYMASTERDB.
MySQLConnection.java 94 (13 years ago) by duarte: Simplified the code for dealing with text/numerical keys. Now there's no more double methods Integer/String, rather the methos use a generic Object[] that stores either String[] or Integer[] depending on the case. Thus modified a few methods in DataDistributer, DataDistribution and MySQLConnection.
DataDistribution.java 94 (13 years ago) by duarte: Simplified the code for dealing with text/numerical keys. Now there's no more double methods Integer/String, rather the methos use a generic Object[] that stores either String[] or Integer[] depending on the case. Thus modified a few methods in DataDistributer, DataDistribution and MySQLConnection.
DataDistributer.java 94 (13 years ago) by duarte: Simplified the code for dealing with text/numerical keys. Now there's no more double methods Integer/String, rather the methos use a generic Object[] that stores either String[] or Integer[] depending on the case. Thus modified a few methods in DataDistributer, DataDistribution and MySQLConnection.
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