| Path | Details |
|---|---|
 trunk/Manifest.txt
(Copied from branches/aglappe-jung/Manifest.txt, r491) |
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 trunk/actionTools/
(Copied from branches/aglappe-jung/actionTools, r491) |
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| trunk/benchmarkGraphAlgorithm.java
(Copied from branches/aglappe-jung/benchmarkGraphAlgorithm.java, r491) |
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| trunk/calculateGridDensity.java
(Copied from branches/aglappe-jung/calculateGridDensity.java, r491) |
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| trunk/cnCoarseNbhood.java
(Copied from branches/aglappe-jung/cnCoarseNbhood.java, r491) |
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| trunk/cnEvalTargetNbhood.java
(Copied from branches/aglappe-jung/cnEvalTargetNbhood.java, r491) |
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| trunk/cnHashIterNbhood.java
(Copied from branches/aglappe-jung/cnHashIterNbhood.java, r491) |
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| trunk/cnex1.java
(Copied from branches/aglappe-jung/cnex1.java, r491) |
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| trunk/compareCMs.java
(Copied from branches/aglappe-jung/compareCMs.java, r491) |
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| trunk/createGraphDb.sh
(Copied from branches/aglappe-jung/createGraphDb.sh, r491) |
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| trunk/dumpseq.java
(Copied from branches/aglappe-jung/dumpseq.java, r491) |
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| trunk/genDbGraph.java
(Copied from branches/aglappe-jung/genDbGraph.java, r491) |
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| trunk/genGraph.java
(Copied from branches/aglappe-jung/genGraph.java, r491) |
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| trunk/graphAveraging/
(Copied from branches/aglappe-jung/graphAveraging, r491) |
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| trunk/hashIterNbhood.java
(Copied from branches/aglappe-jung/hashIterNbhood.java, r491) |
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| trunk/iterEvalNbhood.java
(Copied from branches/aglappe-jung/iterEvalNbhood.java, r491) |
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| trunk/iterateNbhood.java
(Copied from branches/aglappe-jung/iterateNbhood.java, r491) |
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| trunk/iterateNbs.java
(Copied from branches/aglappe-jung/iterateNbs.java, r491) |
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| trunk/iterateUpperNbhood.java
(Copied from branches/aglappe-jung/iterateUpperNbhood.java, r491) |
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| trunk/iterateUpperNbs.java
(Copied from branches/aglappe-jung/iterateUpperNbs.java, r491) |
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| trunk/listInfoGain.java
(Copied from branches/aglappe-jung/listInfoGain.java, r491) |
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| trunk/listInfoLoss.java
(Copied from branches/aglappe-jung/listInfoLoss.java, r491) |
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| trunk/makeNbhTbl.java
(Copied from branches/aglappe-jung/makeNbhTbl.java, r491) |
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| trunk/maxInfoGain.java
(Copied from branches/aglappe-jung/maxInfoGain.java, r491) |
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| trunk/minInfoGain.java
(Copied from branches/aglappe-jung/minInfoGain.java, r491) |
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| trunk/proteinstructure/
(Copied from branches/aglappe-jung/proteinstructure, r491) |
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| trunk/reconstruct.java
(Copied from branches/aglappe-jung/reconstruct.java, r491) |
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| trunk/rewriteNBHood.java
(Copied from branches/aglappe-jung/rewriteNBHood.java, r491) |
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| trunk/rewriteNBHood_parallel.java
(Copied from branches/aglappe-jung/rewriteNBHood_parallel.java, r491) |
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| trunk/sadp/
(Copied from branches/aglappe-jung/sadp, r491) |
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| trunk/scoreTargetMoves.java
(Copied from branches/aglappe-jung/scoreTargetMoves.java, r491) |
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| trunk/testClusterConnection.java
(Copied from branches/aglappe-jung/testClusterConnection.java, r491) |
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| trunk/testDeltaDistanceMap.java
(Copied from branches/aglappe-jung/testDeltaDistanceMap.java, r491) |
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| trunk/testGetChains.java
(Copied from branches/aglappe-jung/testGetChains.java, r491) |
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| trunk/testGraph2Pml.java
(Copied from branches/aglappe-jung/testGraph2Pml.java, r491) |
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| trunk/testGraphAverager.java
(Copied from branches/aglappe-jung/testGraphAverager.java, r491) |
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| trunk/testJUNGframework.java
(Copied from branches/aglappe-jung/testJUNGframework.java, r491) |
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| trunk/testMySQLConnection.java
(Copied from branches/aglappe-jung/testMySQLConnection.java, r491) |
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| trunk/testPdb.java
(Copied from branches/aglappe-jung/testPdb.java, r491) |
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| trunk/testPyMol.java
(Copied from branches/aglappe-jung/testPyMol.java, r491) |
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| trunk/testPymolServer.java
(Copied from branches/aglappe-jung/testPymolServer.java, r491) |
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| trunk/testResidueSelectionString.java
(Copied from branches/aglappe-jung/testResidueSelectionString.java, r491) |
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| trunk/tinker/
(Copied from branches/aglappe-jung/tinker, r491) |
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| trunk/tools/
(Copied from branches/aglappe-jung/tools, r491) |
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| trunk/writeTargetMoves.java
(Copied from branches/aglappe-jung/writeTargetMoves.java, r491) |
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