Bioinformatics.org
[Repositive.io]
[OMICtools]
Not logged in
  • Log in
  • Bioinformatics.org
    Membership (40077+) Group hosting [?] Wiki
    Franklin Award
    Sponsorships

    Careers
    About bioinformatics
    Bioinformatics training
    Bioinformatics jobs

    Research
    All information groups
    Online databases Online analysis tools Online education tools More tools

    Development
    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    Forums
    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • News & Commentary - Message forums

    BIRCH Version A1.99
    Submitted by Brian Fristensky; posted on Wednesday, June 28, 2006

    Submitter


    BIRCH Version A1.99

    o miniBIRCH is now supported by birchconfig, the graphic
    install wizard. The install procedure for minibirch is
    almost identical to that for a complete BIRCH installation,
    with the addition that for miniBIRCH, the New Install window
    will have an additional 'miniBIRCH Master Directory' field.
    o New: ArrayNorm - Normalize raw gene array data, prior to analysis
    o New: TIGR-TM4 Microarray programs:
    ExpressConverter - converts array data to TIGR format
    MIDAS - Normalization and analysis
    MEV - Multi-experiment viewer for data mining
    o New: weighbor: Neighbor-Joining program which produces more reliable
    trees than traditional NJ. Available as an option in GDE.
    o Documentation pages for Packages and Programs now contain links
    to a glossary page which gives definitions for each field on the
    page.
    o Treetool, the tree editor, is now available for all platforms.
    Previously, colormap issues prevented it from running on Solaris.
    Thanks to Eric Linton for fixing this problem.
    o readseq has been upgraded to version 2.1.23.
    o GDE has been upgraded to version 2.4.5. GDE 2.1.5, wrote some
    temporary files to /usr/tmp, which is not present on some Debian
    systems. GDE 2.4.5 writes these files to /tmp, which is present on all
    Unix and Linux systems.
    o dapple has been removed from the BIRCH core distribution.

    ========================================================

    The latest release of BIRCH (A1.99) is available at the
    BIRCH Web site

    home.cc.umanitoba.ca/~psgendb

    under the link 'BIRCH Administrator's Guide'.
    Discussion forums: BIRCH Version A1.99

    Expanded view | Monitor forum | Save place

    Start a new thread:
    You have to be logged in to post a reply.

     

    Copyright © 2018 · Scilico, LLC