Bioinformatics.org
[University of Birmingham]
[Patsnap]
Not logged in
  • Log in
  • Bioinformatics.org
    Membership (44431+) Group hosting [?] Wiki
    Franklin Award
    Sponsorships

    Careers
    About bioinformatics
    Bioinformatics jobs

    Research
    All information groups
    Online databases Online analysis tools Online education tools More tools

    Development
    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    Forums
    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • Career Center - Message forums

    Opportunity: Software Developer @ Weill Cornell Medical College--New York, NY (US)
    Submitted by Doron Betel; posted on Wednesday, July 18, 2012

    BACKGROUND

    The Epigenomics Core Facility at Weill Cornell Medical College (WCMC) is recruiting a software developer for the analysis, management and visualizing of multidimensional, high throughout genomics, epigenomics and other large scale biological data.

    The Epigenomics Core Facility provides a wide range of epigenomic resources and services to the WCMC community and collaborating institutes that are primarily based on high-throughput sequencing approaches. These include DNA methylation profiling, protein-DNA interaction (ChIP-seq), RNA-seq and whole genome sequencing. There is strong emphasis on providing computational infrastructure and analysis support to enable novel discoveries and advance clinical applications (epicore.med.cornell.edu).

    RESPONSIBILITIES

    • Design and implement computational pipelines for tracking and the analysis of high-throughput sequencing data, including building databases and software infrastructure to handle large data sets processed by in-house and third party algorithms;
    • Gather user requirements, design, implement and maintain data storage and management solutions.
    • Develop graphical user interfaces and web-based application for analysis of high-throughput sequencing data.
    • Develop algorithms and software tools for the analysis of new experimental techniques and provide computational support for the scientific development of the Epigenomics core.

    REQUIREMENTS

    • Bachelor's degree in computer science, engineering, mathematics, or bioinformatics, with a strong programming background; a graduate degree is preferred.
    • Expert-level knowledge of the UNIX/Linux environment, including shell scripting, a high-level scripting language (Perl, Python, or Ruby), and a low-level, object-oriented programming language (C/C++ or Java).
    • Experience in using and programming relational databases, including schema design.
    • Experience in development and deployment of parallel algorithms in high-performance and cluster computing environments.
    • Experience developing web-based applications by PHP, Rails and java scripts.
    • Familiarity with the use of open source software libraries in software development.
    • Knowledge of a scientific data analysis package such as R or MATLAB, as well as background in the biological sciences, is highly desirable.

    HOW TO APPLY

    Please submit a cover letter, contact information (including email address) for three references, and resume to: epicorejobs[at]med.cornell.edu

    Expanded view | Monitor forum | Save place

    Start a new thread:
    You have to be logged in to post a reply.

     

    Copyright © 2024 Scilico, LLC · Privacy Policy