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BACKGROUND

Marshfield Clinic is one of the largest patient care, research & educational systems in the United States. We employ over 8,000 individuals with talents in over 80 medical specialties and subspecialties. In addition to 48 centers throughout 35 northern, central and western Wisconsin communities with strong affiliations to the local hospitals, our subsidiaries include Security Health Plan, Marshfield Clinic Research Foundation, Marshfield Clinic Laboratories, Marshfield Clinic Applied Sciences, Marshfield Clinic Education Foundation and more.

This position is a Bioinformatics Research programmer analyst position in Computational Biology / Biomedical Informatics. This position is specific to our ongoing and proposed projects related to developing computational models to elucidate the causal pathways of gene expression regulatory networks, phenotypic effects (e.g. individual differences in disease susceptibility and responses to medications) of genetic/transcriptional variations, functional elements in non-coding DNA sequences, and Biomedical literature mining among others.

REQUIREMENTS

The successful applicant will have knowledge and experience with advanced data-structures, multi-threading, multi-core, large memory environment, large sparse datasets and performance tuning is desired. Experience in gene network modeling, genome sequence analysis, biological text mining, machine learning, and Bayesian networks, Conditional Random Fields, HMM models will be of advantage.

The applicant will have a chance to develop programs and implement sophisticated algorithms related to Machine Learning / Artificial Intelligence. Particular emphasis will be given to static/dynamic Bayesian networks data mining, causal Bayesian networks.

Education: MS degree or equivalent, and research experience in Computer Science, Bioinformatics or related areas required.

Experience: Require experience in one or more of the following programming languages: JAVA and Perl. Require experience in one or more of the following database systems: ORACLE, Microsoft SQL Server, or MySQL. Require experience in one or more of the following: advanced data-structures, multi-threading, multi-core, large memory environment, large sparse datasets and performance tuning. Require experience in one or more of the following: gene regulatory network modeling, genome sequence analysis, biological text mining, machine learning and Bayesian network, Conditional Random Fields, and/or HMM models. Experience with one or more of the following technologies is preferred: XML, PHP, PERL, BioPERL, Solr, Lucene, RSS, NoSQL and Apache. Experience in a biomedical domain preferred. Prefer five years of professional experience in advanced computer programming.

LOCALE

Marshfield, Wisconsin has a community of 19,500 and is proud of our family-friendly environment. Marshfield is ranked "Best Place to Live in Wisconsin and Eighth Best Place to Live in America" by Bizjournals.com and offers excellent health care, schools, vitality, connection to cultural mainstream, and a low cost of living all wrapped up in a small-town feel. We are located in the middle of the state with easy access to a network of interstate, U.S. and State highways.

HOW TO APPLY

For more information, or to apply online, please access our website at http://www.marshfieldclinic.jobs Reference Job# MC120780.

Marshfield Clinic
1000 N. Oak Avenue
Marshfield, WI 54449

POLICY

Marshfield Clinic is an Affirmative Action/Equal Opportunity employer that values diversity. Minorities, females, individuals with disabilities and veterans are encouraged to apply.

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