Bioinformatics.org
[Regeneron]
[Repositive.io]
[OMICtools]
Not logged in
  • Log in
  • Bioinformatics.org
    Membership (39484+) Group hosting [?] Wiki
    Franklin Award
    Sponsorships

    Careers
    About bioinformatics
    Bioinformatics training
    Bioinformatics jobs

    Research
    All information groups
    Online databases Online analysis tools Online education tools More tools

    Development
    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    Forums
    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • zEST: Gene discovery by EST clusters - Message forums

    Discussion forums: Open Discussion

    Expanded view | Monitor forum | Save place

    Message
    LArge clusters Problem
    Submitted by Nobody; posted on Monday, May 02, 2005
    Hi all, I am trying to cluster 300 K EST's that i got from the NCBI using stackPack. The clutsering give me results totally different from what is present in uniGene. I happen to get 2 large clusters (64k and 34k sequences). If i try to break them by increasing the identity or length of region compared, i get and huge amount of singletons. I was wondering if anyone dealt with such a hassle before ??? Any suggestions will be greately appreciated. Thank you bingo11{AT}hotmail.com



    Post a followup to this message:
    You have to be logged in to post a reply.
    Thread view
    LArge clusters Problem
    Submitted by Nobody; posted on Monday, May 02, 2005
    Hi all, I am trying to cluster 300 K EST's that i got from the NCBI using stackPack. The clutsering give me results totally different from what is present in uniGene. I happen to get 2 large clusters (64k and 34k sequences). If i try to break them by increasing the identity or length of region compared, i get and huge amount of singletons. I was wondering if anyone dealt with such a hassle before ??? Any suggestions will be greately appreciated. Thank you bingo11{AT}hotmail.com

     

    [G6GFindr]
    Copyright © 2018 · Scilico, LLC