Contents of the Bioinformatics.Org FTP pub directory as of Wed May 23 22:00:01 EDT 2012 !CONTENTS ABSmith/ smithwaterman.zip ALiBio/ alibio-0.9.tar.gz AcE/ ace.pl testsets.human-0.1.0.tgz testsets.tar.gz AntPred/ Antimicrobial/ BIO-NIX/ BTL/ BTL3.tar.gz Bio-Wave/ BioQuery/ BioSVG/ BioSVG-0.01.tar.gz BioSVG-0.02.tar.gz BioinfoUnicz/ BranchClust/ CAT/ CDMgroup/ CalPred/ CalPred-Server-v1.0.zip CoffeeMug/ Excel2SVM/ FLIMS/ FRASS/ FishNChips/ GBPPred/ GFIT/ GO4J/ go4j.tar.gz go4j.zip go4j1.1.zip GUIBlast/ blastgui.zip guiblast.zip Gencytis/ Genquire/ Genquire.3.4.1.tar.gz GenquireInstall_v6.tar.gz GenquireInstaller_v7.tar.gz GenquireInstaller_v8.tar.gz Genquire_3.02.tar.gz Genquire_3.03.tar.gz Genquire_3.40.zip Genquire_3_00.tar.gz Genquire_3_00a.tar.gz Installer_v5.tar.gz WinGenquire.zip WinGenquire1_1.zip Gints/ ISSCD/ Ishmael/ JDesigner/ JDSetup.exe JaMBW/ LMG/ LuGenD/ MBRC/ NAPID/ NNRLE/ PM-BLAST/ PartiGene/ PartiGeneV2.2.tar.gz WebPartiGene.tar.gz annot8r_blast2GO_0.3.tar.gz annot8r_physprop.tar.gz prot4EST_2.1.1.tar.gz trace2dbest_2.1.1.tar.gz Pastel/ Pharprotics/ PriMux/ PrimerMatch/ PrimerMatch.tar.gz RDFBuilder/ JavaDoc.rar RDFbuilder.jar README.TXT aewrapperConfig.xml mage-rdf-model-empty.obm mage-rdf-model-empty.owl Reveal/ SMS/ sms.zip sms_v_1_1.zip SPMS/ SeWeR/ sewer-3.0.tar.gz SurpResi/ UniGeneDLST/ dlst.tgz dlst_v0.9.tgz WAX/ Wasabi/ WinBLAST/ Setup-0.1.4.exe Setup-0.1.5.exe Setup.exe WinBLAST-0.1.1a-bin.zip WinBLAST-0.1.1a-src.zip WinBLAST-0.1.2a-bin.zip WinBLAST-0.1.2a-src.zip WinBLAST-0.1a-src.zip WinBLAST-0.1a.zip Winblast-0.1.5-src.zip abccsoftware/ abe/ abe-1.0-source.zip abe-1.0-user-manual.zip abe-1.0-win2k.exe abi/ ABI-1.0.tar.gz abiftake/ abiparser/ abiparser-0.17.tgz absmith: symbolic link to `ABSmith' ace: symbolic link to `AcE' advaitha/ algpeptconf/ alibio: symbolic link to `ALiBio' alignnemo/ alkahest/ aminonet/ AminoNet-1.0.zip AminoNet-2.0.zip AminoNet.1.0.zip amrita-bio/ anachemcancer/ annhyb/ anovarray/ AnovArray.tar.gz anthedna/ antidb/ antimicrobial: symbolic link to `Antimicrobial' antiml/ BIRC5-XSL Output.html BIRC5.xml antisenseML.xsd antisenseML.xslt miR-21-XSL Output.html miR-21.xml perl script.rar perl script/ Perl Module(CPAN.org)/ XML-DOM-1.44.tar.tar XML-Grove-0.46alpha.tar.gz XML-RegExp-0.03.tar.gz libxml-perl-0.08.tar.tar README README.bak anticonv.pl antisenseml_template.xls inputfile template.xml antpred: symbolic link to `AntPred' appvaldocs/ OQ_Protocol_v002.rtf.gz PQ_Protocol_v002.rtf.gz Validation_Plan_v002.rtf.gz Validation_Plan_v003.pdf.gz Validation_Plan_v004.pdf.gz arcstar/ testfile123.html argo/ arrayalizer/ asap/ asidb/ assemble/ 1.0.1/ CHANGELOG assemble.jar paradise.jar 1.0.2/ CHANGELOG README assemble.jar geronimo-jta_1.1_spec-1.1.1.jar graph-matching.jar lucene-core-2.9.1.jar neo4j-commons-1.0.jar neo4j-index-1.0.jar neo4j-kernel-1.0.jar neo4j-remote-graphdb-0.6.jar neo4j-shell-1.0.jar paradise.jar 1.0.3/ CHANGELOG assemble.jar launch_Assemble_for_Windows.bat updater.jar 1.0.4/ Assemble_1.0.4.zip 1.0.5_beta1/ CHANGELOG assemble.jar paradise.jar updater.jar 1.0.5_beta2/ CHANGELOG assemble.jar mypdb.zip paradise.jar 1.0/ Assemble_1.0.zip 1.0_RC1/ Assemble_1.0_RC1.tar.gz 1.0_RC2/ CHANGELOG assemble.jar paradise.jar tertiary_data.zip 1.0_RC3/ Assemble_1.0_RC3.tar.gz CHANGELOG SnowLeopard_Assemble_Update.zip algorithms/ MC_Annotate.zip RNAVIEW.tar.gz RNAfold_wrapper.sh RNAplot_wrapper.sh ViennaRNA-1.8.5.tar.gz ViennaRNA.tar.gz carnac.tar.gz contrafold.tar.gz locarna-1.6.1.tar.gz locarna-1.6.2pre.tar.gz updates.xml versions.xml assembly/ asterias/ atlas/ ayurveda/ ayurvedicdb/ ball/ bang/ basepad/ base.exe batcave/ bayallele/ bbar/ bbs/ data.tar.gz db.tar.gz bctool/ bdpg/ benchmark/ bertone/ bialgores/ bicat-plus/ BicAT_plus.rar bicchop/ binosys/ bio-innovators/ bio-linux/ README bio-linux-5.01-beta.iso.tar.gz index.html bio-nix: symbolic link to `BIO-NIX' bio-toolkit/ bio-wave: symbolic link to `Bio-Wave' biobanner/ biobasestation/ biobrew/ srpms-other/ BIOrpms-source.tar.gz BioLinux-source.tar.gz srpms/ 3.0/ EMBOSS-2.6.0-1.src.rpm 3.1/ EMBOSS-2.9.0-6.src.rpm Fasta-3.4-1.src.rpm clustalw-1.8.3-1.src.rpm farmtools-2.0-1.src.rpm fftw-2.1.5-1.src.rpm gromacs-3.2.1-1.src.rpm hmmer-2.3.2-1.src.rpm modulefiles-1.0-2.src.rpm modulesenv-3.1.6-2.src.rpm mrbayes-3.0-1.src.rpm ncbitools-6.1.0-2.src.rpm phylip-3.61-5.src.rpm sgeblast-0.2-1.src.rpm wise-2.2.0-1.src.rpm wwwblast-Aug.06.2002-1.src.rpm 3.3/ EMBOSS-2.9.0-6.src.rpm Fasta-3.4-1.src.rpm clustalw-1.8.3-1.src.rpm farmtools-2.0-1.src.rpm fftw-2.1.5-1.src.rpm gromacs-3.2.1-1.src.rpm hmmer-2.3.2-1.src.rpm hmmer-2.3.2-4.src.rpm modulefiles-1.0-2.src.rpm modulefiles-1.0-3.src.rpm modulesenv-3.1.6-2.src.rpm mrbayes-3.0-1.src.rpm ncbitools-6.1.0-2.src.rpm phylip-3.61-5.src.rpm sgeblast-0.2-1.src.rpm wise-2.2.0-1.src.rpm wwwblast-Aug.06.2002-1.src.rpm 4.1.1/ EMBOSS-3.0.0-1.src.rpm Fasta-3.4-1.src.rpm NCBI-2.2.12-1static.src.rpm Numeric-24.0b2-1.src.rpm biopython-1.40b-1.src.rpm byacc-1.9-29.src.rpm clustalw-1.8.3-1.src.rpm clustalw-mpi-0.13-1.src.rpm fftw-2.1.5-1.src.rpm flex-2.5.4a-34.src.rpm gromacs-3.2.1-1.src.rpm hmmer-2.3.2-4.src.rpm modeltest-3.7-1.src.rpm modulefiles-1.0-3.src.rpm modulesenv-3.1.6-2.src.rpm mpiblast-1.4.0-1.src.rpm mrbayes-3.1-1.src.rpm phylip-3.65-1.src.rpm primer3-1.0.0-1.src.rpm probcons-1.10-1.src.rpm reportlab-1.20-1.src.rpm sgeblast-0.2-1.src.rpm t-coffee-2.66-1.src.rpm wise-2.2.0-1.src.rpm wwwblast-2.2-12.src.rpm 4.1/ EMBOSS-3.0.0-1.src.rpm Fasta-3.4-1.src.rpm NCBI-2.2.12-1static.src.rpm Numeric-24.0b2-1.src.rpm biopython-1.40b-1.src.rpm byacc-1.9-29.src.rpm clustalw-1.8.3-1.src.rpm clustalw-mpi-0.13-1.src.rpm fftw-2.1.5-1.src.rpm flex-2.5.4a-34.src.rpm gromacs-3.2.1-1.src.rpm hmmer-2.3.2-4.src.rpm modeltest-3.7-1.src.rpm modulefiles-1.0-3.src.rpm modulesenv-3.1.6-2.src.rpm mpiblast-1.4.0-1.src.rpm mrbayes-3.1-1.src.rpm phylip-3.65-1.src.rpm primer3-1.0.0-1.src.rpm probcons-1.10-1.src.rpm reportlab-1.20-1.src.rpm sgeblast-0.2-1.src.rpm t-coffee-2.66-1.src.rpm wise-2.2.0-1.src.rpm wwwblast-2.2-12.src.rpm biobrowser/ bioc-sharp/ biocheminf/ bioclues/ biococoa/ BioCocoa.zip biococoa-2.1.0-src.tgz biococoa-2.2.2-src.tgz biococoa12.zip biococoa15.zip biococoa16.zip biodp/ bioecma/ biogress/ bioinfo-af-cnr/ bioinfo-ed/ bioinfo-wbench/ bioinfo2008ucdd/ bioinfojuit/ Tutorial.rar UDT.rar bioinformatics/ BiO-Professional.pdf bioinformatist/ bioinfounicz: symbolic link to `BioinfoUnicz' bioinfozilla/ bioinsilico/ biojafa/ biolegato/ biolet/ biolib/ biolore/ biomap/ bioneeds/ EGTDC_PollingQuestions.doc Questionnaire_Databases.doc README User_Survey.doc bioneeds.php bionmf/ bioNMF.zip bioNMF1.0.1.zip bioNMFSources.zip bioNMFSources1.0.1.zip bioonto/ biophp/ bioquery: symbolic link to `BioQuery' bioremed/ bioscys/ bioseg/ bioseg-0.1.tar.gz bioseg-0.2.tar.gz bioseg-0.3.tar.gz bioseg-0.4.tar.gz bioseg-0.5.tar.gz bioseg-0.6.tar.gz bioseg-0.7.tar.gz bioseg-0.8.tar.gz release-0.8.tar.gz biosoa/ biosoftbuilds/ biosolutions/ biostat/ biosuite/ biosvg: symbolic link to `BioSVG' biovm/ birch/ bisor/ blast2malign/ blast2malign-0.1.tar.gz blast2malign-0.2.tar.gz blast2malign-0.3.tar.gz blast2ps/ blast2ps-0.3.tar.gz blast2ps.0.2.tar.gz blast2ps.tar.gz blastometer/ blissgenetics/ blogo/ Blogo_1.0.tar.gz bmw/ bna/ bna.tar.gz branchclust: symbolic link to `BranchClust' bsmlcreadit/ btl: symbolic link to `BTL' c2analyzer/ calpred: symbolic link to `CalPred' cancer/ canevolvability/ CSim-2000-6-14.zip cat: symbolic link to `CAT' catch/ CATCH3.zip CATCH_User_manual_2010.pdf.gz CATCH_User_manual_2011.pdf data.zip cbesw/ CBESW.tar.gz cd-hit/ Aug-2003/ BINARY/ README cd-hit mcd-hit SOURCE/ Algorithm Algorithm.cd-hi Makefile README cd-hi-class.c++ cd-hi-init.h cd-hi.h cd-hit.c++ mcd-hit.c++ post_cluster.pl CURRENT TEST_RESULTS/ Globins/ README globins630.fa globins630.fa.40 globins630.fa.40.bak.clstr globins630.fa.40.clstr globins630.fa.50 globins630.fa.50.bak.clstr globins630.fa.50.clstr globins630.fa.60 globins630.fa.60.bak.clstr globins630.fa.60.clstr globins630.fa.70 globins630.fa.70.bak.clstr globins630.fa.70.clstr globins630.fa.80 globins630.fa.80.bak.clstr globins630.fa.80.clstr globins630.fa.90 globins630.fa.90.bak.clstr globins630.fa.90.clstr globins630.plot.gif globins630.plot.txt Truncated-Sequences-Test/ README truncated_c_terminal.test.fa truncated_c_terminal.test.fa.out.100 truncated_c_terminal.test.fa.out.100.clstr truncated_c_terminal.test.fa.out.99 truncated_c_terminal.test.fa.out.99.clstr truncated_n_terminal.test.fa truncated_n_terminal.test.fa.out.100 truncated_n_terminal.test.fa.out.100.clstr truncated_n_terminal.test.fa.out.99 truncated_n_terminal.test.fa.out.99.clstr X-Character-Test/ two_random_sequences.fa two_random_sequences.fa.40 two_random_sequences.fa.40.bak.clstr two_random_sequences.fa.40.clstr two_random_sequences_with_a_whole_lot_of_x.fa two_random_sequences_with_a_whole_lot_of_x.fa.40 two_random_sequences_with_a_whole_lot_of_x.fa.40.bak.clstr two_random_sequences_with_a_whole_lot_of_x.fa.40.clstr cd-hi-Jul-30-01.tar.gz cd-hit-2006-0215.tar.gz cd-hit-2006-0411.tar.gz cd-hit-2006-1204.tar.gz cd-hit-2007-0131-win32.tar.gz cd-hit-2007-0131.tar.gz cd-hit-2009-0421-win32.tar.gz cd-hit-2009-0421.tar.gz cd-hit-2009-0427.tar.gz cd-hit-Aug-01-03.tar.gz cd-hit-Jan-23-02.tar.gz cd-hit-Mar-08-04.tar.gz cd-hit-v4.3-2010-10-25.tgz cd-hit-v4.5.4-2011-03-07.tgz cdhit-2009-1020-release-4.0-beta.tar.gz cdhit-v4.0-2010-04-20.tar.gz goToWebsite.php cdmgroup: symbolic link to `CDMgroup' cdnctc13129/ Additional_File_1.zip Additional_File_2.zip C_diphtheriae_reannotation.embl.tar.gz cebib/ celutil/ celutil-1.0.src.tar.gz cgview/ chemchains/ CC1.01.tar.gz CC1.01.zip CC1.10.tar.gz CC1.10.zip CC1.20.tar.gz CC1.20.zip CC1.21.tar.gz CC1.21.zip CC1.22.tar.gz CC1.22.zip ChemChains1.0.tar.gz ChemChains1.0.zip chinook/ chromhome/ citeman/ citeman-0.2.zip clusterfunc/ cmview/ codon/ cua v1.0 10-23-04.zip coffeemug: symbolic link to `CoffeeMug' combosa3d/ combosa3d.zip combosa3dv1_1.zip compare-genome/ coralgenes/ craig/ crnpred/ crnpred-1.1.tar.gz crnpred.tar.gz crnpred/ 00README WMATS WMATS2000 WMATS5000 WMATS_LIN WMAT_ENS bin/ run_crn.sh make.sh sample/ 3chyA.fa 3chyA.out d1a6m__.out d1a6m__.prof d1ifra_.out d1ifra_.prof d3nul__.out d3nul__.prof d8abp__.out d8abp__.prof src/ ChangeLog Makefile blast.c blast.h chkaccu.c chkaccu.h crndump.c eprintf.c eprintf.h lpredm.c secdp.c sov.c sov.h xesn.c xesn.h xpredm.c xpredm.h xpredmsub.c w2000/ Mat/ win2000_21.0.01a.mat win2000_21.0.01b.mat win2000_21.0.01c.mat win2000_21.0.01d.mat win2000_21.0.01e.mat win2000_21.0.01f.mat win2000_21.0.01g.mat win2000_21.0.01h.mat win2000_21.0.01i.mat win2000_21.0.01j.mat win2000_21.0.01k.mat win2000_21.0.01l.mat win2000_21.0.01m.mat win2000_21.0.01n.mat win2000_21.0.01o.mat win2000_21.0.01p.mat win2000_21.0.01q.mat win2000_21.0.01r.mat win2000_21.0.01s.mat win2000_21.0.01t.mat wmat2000_20_1.0a.mat wmat2000_20_1.0b.mat wmat2000_20_1.0c.mat wmat2000_20_1.0d.mat wmat2000_20_1.0e.mat wmat2000_20_1.0f.mat wmat2000_20_1.0g.mat wmat2000_20_1.0h.mat wmat2000_20_1.0i.mat wmat2000_20_1.0j.mat wmat2000_20_1.0k.mat wmat2000_20_1.0l.mat wmat2000_20_1.0m.mat wmat2000_20_1.0n.mat wmat2000_20_1.0o.mat wmat2000_20_1.0p.mat wmat2000_20_1.0q.mat wmat2000_20_1.0r.mat wmat2000_20_1.0s.mat wmat2000_20_1.0t.mat WMATS WMAT_ENS mkwmats.sh w_cn/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat w_rwco/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat w_ss/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat w5000/ Mat/ win5000_21.0.01a.mat win5000_21.0.01b.mat win5000_21.0.01c.mat win5000_21.0.01d.mat win5000_21.0.01e.mat win5000_21.0.01f.mat win5000_21.0.01g.mat win5000_21.0.01h.mat win5000_21.0.01i.mat win5000_21.0.01j.mat win5000_21.0.01k.mat win5000_21.0.01l.mat win5000_21.0.01m.mat win5000_21.0.01n.mat win5000_21.0.01o.mat win5000_21.0.01p.mat win5000_21.0.01q.mat win5000_21.0.01r.mat win5000_21.0.01s.mat win5000_21.0.01t.mat wmat5000_50_1.0a.mat wmat5000_50_1.0b.mat wmat5000_50_1.0c.mat wmat5000_50_1.0d.mat wmat5000_50_1.0e.mat wmat5000_50_1.0f.mat wmat5000_50_1.0g.mat wmat5000_50_1.0h.mat wmat5000_50_1.0i.mat wmat5000_50_1.0j.mat wmat5000_50_1.0k.mat wmat5000_50_1.0l.mat wmat5000_50_1.0m.mat wmat5000_50_1.0n.mat wmat5000_50_1.0o.mat wmat5000_50_1.0p.mat wmat5000_50_1.0q.mat wmat5000_50_1.0r.mat wmat5000_50_1.0s.mat wmat5000_50_1.0t.mat WMATS WMAT_ENS w_cn/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat w_rwco/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat w_ss/ xwoutalla.mat xwoutallb.mat xwoutallc.mat xwoutalld.mat xwoutalle.mat xwoutallf.mat xwoutallg.mat xwoutallh.mat xwoutalli.mat xwoutallj.mat xwoutallk.mat xwoutalll.mat xwoutallm.mat xwoutalln.mat xwoutallo.mat xwoutallp.mat xwoutallq.mat xwoutallr.mat xwoutalls.mat xwoutallt.mat wlin/ w_1d/ lwout00a.mat lwout01a.mat lwout02a.mat lwout03a.mat lwout04a.mat lwout05a.mat lwout06a.mat lwout07a.mat lwout08a.mat lwout09a.mat lwout10a.mat lwout11a.mat lwout12a.mat lwout13a.mat lwout14a.mat w_cn/ lwout00a.mat lwout01a.mat lwout02a.mat lwout03a.mat lwout04a.mat lwout05a.mat lwout06a.mat lwout07a.mat lwout08a.mat lwout09a.mat lwout10a.mat lwout11a.mat lwout12a.mat lwout13a.mat lwout14a.mat w_rwco/ lwout00a.mat lwout01a.mat lwout02a.mat lwout03a.mat lwout04a.mat lwout05a.mat lwout06a.mat lwout07a.mat lwout08a.mat lwout09a.mat lwout10a.mat lwout11a.mat lwout12a.mat lwout13a.mat lwout14a.mat w_ss/ lwout00a.mat lwout01a.mat lwout02a.mat lwout03a.mat lwout04a.mat lwout05a.mat lwout06a.mat lwout07a.mat lwout08a.mat lwout09a.mat lwout10a.mat lwout11a.mat lwout12a.mat lwout13a.mat lwout14a.mat ctls/ cvg/ cyntenator/ cyntenator-1.0-2009-08-17.tar.gz cyntenator-1.0-2009-08-17.tgz dbbp/ dchip/ dcpp/ delila-genome/ Delgen-1.0.tar.gz deltastat/ deltastat-0.2.0.tar.gz deltastat-0.3.1.tar.gz dengueDTDB/ denguedtdb: symbolic link to `dengueDTDB' deodas/ dip4fish/ disperse/ data/ CCDS.20080902.txt ccds-latest.txt: symbolic link to `CCDS.20080902.txt' dbSNP-latest.txt: symbolic link to `dbSNP_127.txt' dbSNP_127.txt disperse-1.0.0-distribution.tar.gz disperse-1.0.0-distribution.zip disperse-1.0.1-distribution.tar.gz disperse-1.0.1-distribution.zip disperse-1.0.1.tar.gz disperse-1.0.1.zip disperse-1.0.2-distr.tar.gz disperse-1.0.2-distr.zip disperse-1.0.3-distribution.tar.gz disperse-1.0.3-distribution.zip releases/ edu/ stanford/ disperse/ 1.0.0/ disperse-1.0.0-javadoc.jar disperse-1.0.0-javadoc.jar.md5 disperse-1.0.0-javadoc.jar.sha1 disperse-1.0.0-sources.jar disperse-1.0.0-sources.jar.md5 disperse-1.0.0-sources.jar.sha1 disperse-1.0.0.jar disperse-1.0.0.jar.md5 disperse-1.0.0.jar.sha1 disperse-1.0.0.pom disperse-1.0.0.pom.md5 disperse-1.0.0.pom.sha1 1.0.1/ disperse-1.0.1-javadoc.jar disperse-1.0.1-javadoc.jar.md5 disperse-1.0.1-javadoc.jar.sha1 disperse-1.0.1-sources.jar disperse-1.0.1-sources.jar.md5 disperse-1.0.1-sources.jar.sha1 disperse-1.0.1.jar disperse-1.0.1.jar.md5 disperse-1.0.1.jar.sha1 disperse-1.0.1.pom disperse-1.0.1.pom.md5 disperse-1.0.1.pom.sha1 1.0.2/ disperse-1.0.2-javadoc.jar disperse-1.0.2-javadoc.jar.md5 disperse-1.0.2-javadoc.jar.sha1 disperse-1.0.2-sources.jar disperse-1.0.2-sources.jar.md5 disperse-1.0.2-sources.jar.sha1 disperse-1.0.2.jar disperse-1.0.2.jar.md5 disperse-1.0.2.jar.sha1 disperse-1.0.2.pom disperse-1.0.2.pom.md5 disperse-1.0.2.pom.sha1 1.0.3/ disperse-1.0.3.jar disperse-1.0.3.jar.md5 disperse-1.0.3.jar.sha1 disperse-1.0.3.pom disperse-1.0.3.pom.md5 disperse-1.0.3.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 net/ sf/ apptools/ apptools-core/ 1.5.0/ apptools-core-1.5.0.jar apptools-core-1.5.0.jar.md5 apptools-core-1.5.0.jar.sha1 apptools-core-1.5.0.pom apptools-core-1.5.0.pom.md5 apptools-core-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 apptools-platform/ 1.5.0/ apptools-platform-1.5.0.jar apptools-platform-1.5.0.jar.md5 apptools-platform-1.5.0.jar.sha1 apptools-platform-1.5.0.pom apptools-platform-1.5.0.pom.md5 apptools-platform-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 apptools-workbench/ 1.5.0/ apptools-workbench-1.5.0.jar apptools-workbench-1.5.0.jar.md5 apptools-workbench-1.5.0.jar.sha1 apptools-workbench-1.5.0.pom apptools-workbench-1.5.0.pom.md5 apptools-workbench-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 apptools/ 1.5.0/ apptools-1.5.0.pom apptools-1.5.0.pom.md5 apptools-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 textio/ 0.2/ textio-0.2.jar textio-0.2.jar.md5 textio-0.2.jar.sha1 textio-0.2.pom textio-0.2.pom.md5 textio-0.2.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 org/ moltools/ moltools-core/ 1.4.0/ moltools-core-1.4.0.jar moltools-core-1.4.0.jar.md5 moltools-core-1.4.0.jar.sha1 moltools-core-1.4.0.pom moltools-core-1.4.0.pom.md5 moltools-core-1.4.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 moltools-design/ 1.4.0/ moltools-design-1.4.0.jar moltools-design-1.4.0.jar.md5 moltools-design-1.4.0.jar.sha1 moltools-design-1.4.0.pom moltools-design-1.4.0.pom.md5 moltools-design-1.4.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 moltools-workbench/ 1.4.0/ moltools-workbench-1.4.0.jar moltools-workbench-1.4.0.jar.md5 moltools-workbench-1.4.0.jar.sha1 moltools-workbench-1.4.0.pom moltools-workbench-1.4.0.pom.md5 moltools-workbench-1.4.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 moltools/ 1.4.0/ moltools-1.4.0.pom moltools-1.4.0.pom.md5 moltools-1.4.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 probemaker-core/ 1.5.0/ probemaker-core-1.5.0.jar probemaker-core-1.5.0.jar.md5 probemaker-core-1.5.0.jar.sha1 probemaker-core-1.5.0.pom probemaker-core-1.5.0.pom.md5 probemaker-core-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 probemaker-stdext/ 1.5.0/ probemaker-stdext-1.5.0.jar probemaker-stdext-1.5.0.jar.md5 probemaker-stdext-1.5.0.jar.sha1 probemaker-stdext-1.5.0.pom probemaker-stdext-1.5.0.pom.md5 probemaker-stdext-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 probemaker-swingui/ 1.5.0/ probemaker-swingui-1.5.0.jar probemaker-swingui-1.5.0.jar.md5 probemaker-swingui-1.5.0.jar.sha1 probemaker-swingui-1.5.0.pom probemaker-swingui-1.5.0.pom.md5 probemaker-swingui-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 probemaker/ 1.5.0/ probemaker-1.5.0.pom probemaker-1.5.0.pom.md5 probemaker-1.5.0.pom.sha1 maven-metadata.xml maven-metadata.xml.md5 maven-metadata.xml.sha1 snapshots/ distributome/ dmod/ dmod1.0.jar dnacgr/ dnacgr-0.2.tar.gz dnalinux/ dna50p.iso dnalinux.zip server591.iso.bz2 server592.iso.bz2 test.tgz easyblast/ ebbie/ ecell2/ PerlSetupWEB.exe ecell201win.zip ecell220beta-patch-1.exe ecell220setup.exe ecell225web-all-in-one.exe ecell225web-minimal-set.exe ecell226web-all-in-one.exe ecell226web-minimal-set.exe manual220.zip setbcc.exe ecobiosolutions/ emapimputation/ emapimputation.zip emblex/ emblex.html enzyme/ esp/ espsim/ ESPSim.zip excel2svm: symbolic link to `Excel2SVM' exondata/ A.thaliana.tar.gz Aspergillus.fumigatus.tar.gz Malaria.tar.gz Mus.musculus.tar.gz burge-1997.tar.gz burset-guigo-1996.tar.gz human-features-chr1.tar.gz human-features-chr10.tar.gz human-features-chr11.tar.gz human-features-chr12.tar.gz human-features-chr13.tar.gz human-features-chr14.tar.gz human-features-chr15.tar.gz human-features-chr16.tar.gz human-features-chr17.tar.gz human-features-chr18.tar.gz human-features-chr19.tar.gz human-features-chr2.tar.gz human-features-chr20.tar.gz human-features-chr21.tar.gz human-features-chr22.tar.gz human-features-chr3.tar.gz human-features-chr4.tar.gz human-features-chr5.tar.gz human-features-chr6.tar.gz human-features-chr7.tar.gz human-features-chr8.tar.gz human-features-chr9.tar.gz human-features-chrX.tar.gz human-features-chrY.tar.gz rice100.tar.gz eyelims/ fasimu/ fass/ fct/ ffca/ ffca-1.0.tar.gz ffca-1.01.tar.gz ffct/ findtrna/ firstglance/ fishnchips: symbolic link to `FishNChips' fishpathogens/ flims: symbolic link to `FLIMS' forrester/ fragsize/ fragzise_setup1.zip fragzise_source1.zip setup1.exe frass: symbolic link to `FRASS' freemol/ fskit/ fs_kit.zip fs_kit_gui.zip g-language/ G-language_1.0.0beta_linux.tar.gz G-language_GAE_1.0.2_windows_setup.exe G-language_GAE_1.0.2b_RH7.0-2.tar.gz G-language_GAE_1.0.2b_RH7.3.tar.gz G-language_GAE_v.1.49_Windows_setup.exe G-language_GAE_v.2_PR3_1_linux.tar.gz G-language_GAE_v.2_PR3_linux.tar.gz G-language_GAE_v2_MacOSX_10.2.tgz G-language_GAE_v2_MacOSX_10.2_mod1.tgz G-language_GAE_v2_MacOSX_10.3.tgz g-language-1.6.10.tar.gz g-language-1.6.11.tar.gz g-language-1.6.12.tar.gz g-language-1.6.13.tar.gz g-language-1.6.4.tar.gz g-language-1.6.5.tar.gz g-language-1.6.6.tar.gz g-language-1.6.7.tar.gz g-language-1.6.8.tar.gz g-language-1.6.9.tar.gz g-language-1.7.0.tar.gz g-language-1.7.1.tar.gz g-language_1.6.4.tgz gb-cartool/ gbctr/ gbioseq/ gbioseq-0.2.2.tar.gz gbioseq-0.2.exe gbioseq-0.3.exe gbioseq.exe gbppred: symbolic link to `GBPPred' gclib/ gdl/ gdl-1.0.0.tar.gz gems/ gemvid/ gemvid-2008_10_26_1816.tar.gz gemvid-2008_11_27_1515.tar.gz gemvid-2009_02_07_1817.tar.gz gemvid06.tar.gz genclip/ gencytis: symbolic link to `Gencytis' genealiases/ genealiases.tar.gz gened/ genegnome/ genetdb/ genetdb.data.core.r1.tar.gz genetdb.data.networks.r1.tar.gz geneticaddress/ genewiki/ genlux/ genomedispltool/ Bundle.zip genomics/ genopolisdb/ genpak/ genquire: symbolic link to `Genquire' gfit: symbolic link to `GFIT' ghemical/ gints: symbolic link to `Gints' gln/ go2msig/ go4j: symbolic link to `GO4J' gobu/ gpblast/ gratin/ grn/ guiblast: symbolic link to `GUIBlast' gvenn/ haplocheck/ harwell/ haystack/ helix/ histocheck/ hiv-ckr5/ hydroplot/ ibg/ ibpetrinet/ immigrant/ immune-b/ iocbio/ isakti/ ishmael: symbolic link to `Ishmael' isscd: symbolic link to `ISSCD' jSight/ Blast_blast_blast.tjar Genome_walker.tjar Mandrakes.htm Protein_explorer.tjar Sight_200.jar Sight_212.bin Sight_310_installer.jar Sight_320_installer.jar Specific_range.tjar installer_210.exe installer_210.jar installer_210a.exe installer_210a.jar installer_211.bin installer_211.exe installer_211.jar installer_212.exe installer_212.jar installer_300alpha.jar installer_needJRE_210.exe installer_needJRE_210a.exe installer_needJRE_211.exe installer_needJRE_212.exe jambw: symbolic link to `JaMBW' jannotatix/ jannotatix.jar plugins/ alignace.zip genomatix.zip meme.zip motifsampler.zip plantcare.zip plugins.alglist java-r-nova/ javablastclient/ jbdp/ jcoast/ jdesigner: symbolic link to `JDesigner' jinrescut/ jmcl/ MclInterface.tar.gz MclInterface001.tar.gz jmol-tutorials/ jprotalign/ linux/ JTm-align.tar.gz windowsVM/ JTM-align.exe ReadMe.txt windowsnoVM/ JTM-align.exe ReadMe.txt jsight: symbolic link to `jSight' k2b/ kaks/ kgtests/ kochanczyk/ probal-0.1rc2.tar.gz probal_0.1rc2_i386.deb lapdog/ lcmets/ ldb/ lecb2dgeldb/ legend/ lhdfoundexpert/ libgorx/ README libhippo/ liblink/ librarian/ lindinglab/ lmg: symbolic link to `LMG' lugend: symbolic link to `LuGenD' m-cs/ mac5/ macroshack/ Count/ Count.xls PHARE/ PHARE.xls haplotyper.xls bootstrapper/ bootstrapper.xls format_gel/ format_gel.xls make_structure/ make_structure.xls multiplex/ multiplex.xls taqmanin/ taqmanin.xls tee_off/ tee_off.xls mahco/ massxpert/ matrix/ mattree/ mavric/ maxcontigprob/ mbcb/ mbcbg/ mbetoolbox/ LatestVersionTag README archive/ mbetoolbox_v1.01a.zip mbetoolbox_v1.01b.zip mbetoolbox_v1.02.zip index.html mbetoolbox_logo.gif mblectures/ mbrc: symbolic link to `MBRC' mcldict/ mcsnp/ mdt/ medliner/ meltsim/ COPYING contrib/ nordita-meltsim-20050119.tar.gz meltsim-1.99.0.tar.gz meltsim-win-1-0b2-source.tar.gz meltsim-win-1-0b2.zip metabasis/ metabosim/ metals/ metaquant/ mfoldinterface/ mfoldinterface.exe mfoldinterface1-18.exe obtainmfold.exe obtainmfold.pl micheckout/ microarrayrus/ MicroarrayRUS_Release1_07072011.zip MicroarrayRUS_UserGuide.pdf microcirc/ Vessel_width.jar microsatellite/ mirfinder/ mitsbiotech/ mlpercep/ mmr/ mobbiotools/ molekel/ Molekel5-MAC-PPC-20061021.dmg.zip molekel-5.0.0-alpha-FC5-SUSE10-20061201.tar.bz2 molekel-5.0.0-alpha-FC5-SuSE10-20061113.tar.gz molekel-5.0.0-alpha-FC5-SuSE10-20061311.tar.gz molekel-5.0.0-alpha-MacIntel-20061113.dmg.zip molekel-5.0.0-alpha-MacIntel-20061201.dmg.zip molekel-5.0.0-alpha-WIN-20061113.exe molekel-5.0.0-alpha-WIN-20061311.exe molekel-5.0.0-alpha-win-20061201.exe molekel_5.1_beta_Linux_x86_glibc2_4.tar.gz molekel_5.1_beta_MacOSX_Intel.dmg.zip molekel_5.1_beta_MacOSX_intel.dmg.tar.gz molekel_5.1_beta_win.exe molekel_5_1_1_MacOS_Intel.dmg.zip molekel_5_1_1_MacOS_PPC.dmg.zip molekel_5_1_1_linux_x86_glibc_2_4.tar.gz molekel_5_1_1_win.exe molekel_5_1_MacOSX_Intel.dmg.zip molekel_5_1_MacOSX_Intel_.dmg.zip molekel_5_1_MacOSX_PPC.dmg.zip molekel_5_1_flash_presentations.zip molekel_5_1_flash_tutorials.zip molekel_5_1_linux_x86_glibc2_4.tar.gz molekel_5_1_win.exe molekel_5_2_0_linux_x86_glibc_2_4.tar.gz molekel_5_2_0_win.exe molekel_5_3_0_linux_x86_32.tar.gz molekel_5_3_0_linux_x86_64.tar.gz molekel_5_3_0_win.exe molekel_5_3_0_win32.exe molekel_5_MacOSX_Intel.dmg.zip molekel_5_MacOSX_PPC.dmg.zip molekel_5_SuSE10_FC5_x86.tar.gz molekel_5_linux_x86_glibc-2.3_patch.tar.gz molekel_5_win.exe molekel_MacOSX_5_3_0_i386.dmg.zip molekel_MacOS_5_2_0_i386.dmg.zip molekel_MacOS_5_2_0_ppc.dmg.zip molekel_MacOS_5_3_0_i386.dmg.zip molekel_demo_avi.zip molekel_demo_videos_ogg.tar.gz molekel_dev_mac_intel_061009.dmg.gz molekel_sample_data.zip molekel_win_dev_060928.exe molekel_win_dev_061005.exe openbabel_patch_MacOSX_Intel.tar.gz openbabel_patch_MacOSX_PPC.tar.gz molslidesupport/ moltalk/ MolTalk-1.0a.zip MolTalk-1.2.zip MolTalk-VERSION_1_0a.tar.gz molvis-list/ molvis/ mpia/ mqtl/ metaqtl.jar metaqtl_1.0.zip metaqtl_1.1.1.zip metaqtl_1.1.2.zip metaqtl_1.1.zip mrat/ msatfinder/ HEAR.gbk HEARG4.gbk README.txt gpl.txt msatfinder msatfinder.rc mugen/ mugen-20020102.tgz mugen-20020403.tgz mugen-20021107.tgz mugen-20030908.tgz mugen-data-20021107.tgz muscorian/ mutaprime/ Mutagenesis_Primer_Generator.zip mybioinformatic/ napid: symbolic link to `NAPID' neobio/ nestec/ netsplitter/ Netsplitter_V1.2.zip netsplitter_V1.2.3.zip netsplitter_V1.2.4.zip netsplitter_V1.3.1.zip netsplitter_V1.3.3.zip nettab/ neurominer/ newbio/ nnrle: symbolic link to `NNRLE' oeil-couleur/ cvs-1.11-win-full.zip dossier-formats.zip dossier-sgml.zip fot2pdf-r102.zip installation_oeil-couleur.txt presentation-rasmol.zip presentation-videos.zip presentation.ppt.zip ssh-1.2.14-win32bin.zip oligocounter/ oligofaktory/ omega/ ontap/ ontologizer/ openaccessindia/ openbns/ openclinica/ openlims/ openmicrobio/ openmmsusers/ opennotebook/ openphi/ operon/ orffinder2008/ orlania/ osprai/ owl/ ox2bioinfo/ p53/ paaapa/ parallelsearch/ paraprobe/ partigene: symbolic link to `PartiGene' pastel: symbolic link to `Pastel' patristic/ Patristic-example.zip Patristic-src.tar.gz Patristic-src.zip Patristic.tar.gz Patristic.zip pcalc/ PCalc.EXE PCalc.zip Pcalc_Pascal_source_code.zip pcb2png/ pcb2png.tar.gz pcgdb/ pdbHighlight/ LATEST-1.1.0 README pdbHighlight-1.1.0.tar.gz pdbHighlight.php pdbHighlight.tar.gz pdbHighlight/ Data/ dir.des.scop.txt_1.65 dir.des.scop.txt_1.71 pdbHighlight.php wget_domain_data.plx.log NOTES README pdbHighlight.php ras_script readme.html scopHighlight_using_SCOP_RDB.plx scopHighlight_using_flat_file.plx wget_domain_data.plx rsync_single_PDB_by_code.plx pdbeditor/ PDBEditor.jar SourcePDBEditorFix080528.zip pdbhighlight: symbolic link to `pdbHighlight' pdbtools/ pdbwiki/ pdm/ peakanalyzer/ PeakAnalyzer.tar.gz PeakAnalyzer_1.0.tar.gz PeakAnalyzer_1.3.tar.gz PeakAnnotator_Cpp.tar.gz PeakAnnotator_Cpp_1.0.tar.gz PeakAnnotator_Cpp_1.3.tar.gz PeakAnnotator_Java.tar.gz PeakAnnotator_Java_1.0.tar.gz PeakAnnotator_Java_1.3.tar.gz PeakSplitter_Cpp.tar.gz PeakSplitter_Cpp_1.0.tar.gz PeakSplitter_Java.tar.gz PeakSplitter_Java_1.0.tar.gz pecop/ ncbi.tar.gz penicep/ perlkob/ pes/ pfpusingpp/ pga/ pgetoolbox/ addins/ linux/ mStirling.mexglx ms.mexglx solaris/ src/ mStirling.c ms/ build.m ms.c ms.h rand2t.c streec.c win32/ mStirling.dll ms.dll pharprotics: symbolic link to `Pharprotics' philnimbus/ phoenix/ phoenix_1_0_0_0.zip phpdas/ phplabdb/ phplabware/ phpphylotree/ phpphylotree-0.1.tar.gz phpphylotree-0.2.tar.gz phylomine/ pie/ pinkthing/ pipeline/ pips/ PIPS-1.1.1.tar.gz PIPS-1.1.2.tar.gz pips.tar.gz samples.tar.gz transposaseDB.tar.gz pm-blast: symbolic link to `PM-BLAST' pme/ pocketsample/ ISPyB_PocketSample-1.2.0.0.zip poemexons/ EIDTUTR10982.seded README_10982.txt tutr348.seded pogo/ poly/ poly-0.0.7.tar.gz poly-0.1.1.tar.gz poly.README polymal/ polyxmass/ poolfit/ populations/ populations-1.2.29.tar.gz populations-1.2.30.tar.gz populations-1.2.30beta.exe populations-1.2.30beta.tar.gz populations-1.2.30beta2.exe populations-1.2.32.zip populations-1_2_30.exe populations.exe portrait/ ppmmd/ preclinicaldm/ prep/ PREPv1-0.pl primer3-int-grp/ primermatch: symbolic link to `PrimerMatch' primerpy/ primerx/ primux: symbolic link to `PriMux' proalagar/ project/ prometheus/ prompt/ proplus/ proscurator/ proteincharge/ proteopedialist/ proteosuite/ prp8pir/ pyannhyb/ pymsxml/ PyMsXML_Complete.zip PyMsXML_Complete_0.5.0.zip PyMsXML_Complete_0.5.2.zip PyMsXML_Complete_0.5.3.zip PyMsXML_Complete_0.5.4.zip PyMsXML_Scripts.zip PyMsXML_Scripts_0.5.0.zip PyMsXML_Scripts_0.5.2.zip PyMsXML_Scripts_0.5.3.zip PyMsXML_Scripts_0.5.4.zip qassembler/ r-repo/ rasmol/ README rasmol-2.6b2-linux-i386.tar.gz rbp/ rdfbuilder: symbolic link to `RDFBuilder' rdfscape/ RDFScape-alpha0.1.jar RDFScape.jar RDFScape011.jar RDFScape04.tgz RDFScape04_1.tgz RDFScape_0_4_2-JVM1_5.tgz RDFScape_0_4_2-JVM1_6.tgz RDFScapejar-0_2_1.gz RDFScapejar-2_0_1.gz analysisContexts04.tgz context-pathwaycommons-0_2_1.tgz context-pathwaycommons-HumanCyc-local-interaction.tgz dist04.tgz dist04_1.tgz dist_0_4_2_JVM1_5.tgz dist_0_4_2_JVM1_6.tgz rdfScapeTestContext01.tar.gz rdfscape-0_2_0.tgz vizmap-0_2_1.tgz realignerv/ reannotate/ REannotate.tar.gz reslink/ med2bib.pl reveal: symbolic link to `Reveal' reza/ rnai/ rnawebservices/ rptool/ s2s/ 2.0.1/ CHANGELOG paradise.jar s2s.jar 2.0.2/ CHANGELOG launch_S2S_for_Windows.bat paradise.jar s2s.jar updater.jar 2.0.3/ S2S_2.0.3.zip 2.0.4_beta1/ CHANGELOG paradise.jar s2s.jar updater.jar 2.0/ S2S_2.0.zip 2.0_RC1/ S2S_2.0_RC1.tar.gz 2.0_RC2/ CHANGELOG paradise.jar s2s.jar tertiary_data.zip 2.0_RC3/ CHANGELOG S2S_2.0_RC3.tar.gz updates.xml versions.xml sStu/ sst1.jar sst1_doc.zip sst1_src.zip sachbinfo/ sammd/ sastra/ satellite/ sbetoolbox/ sbml-iea/ scan/ scol/ goToWebsite.php scriptome/ searchpattool/ example&doc/ Rscript.R bestzssup.txt bestzstot.txt final-results-with-pvalue.txt finfo.txt fproba.txt frev.txt ftot.txt patt-cons-mic-tot.txt patt-cons-mic.txt patt-profiles-tot.txt patt-profiles.txt patt-rev-com-tot.txt patt-rev-com.txt patt-similarity-tot.txt patt-similarity.txt patt-similarity_JMP.JMP promospo0abs.txt random-scores.txt readme-searchpattool-doc.pdf resA.txt resC.txt resG.txt resT.txt runreport.txt sites-for-logo-tot.txt sites-for-logo.txt sites-positions-tot.txt sites-positions.txt programs/ compute_pvalue.exe search_best_random_scores.exe searchpattool.exe select-best-zs-sup.exe select-best-zs-tot.exe sources/ compute_pvalue.cpp listgen.h search_best_random_scores.cpp searchpattool.cpp select-best-zs-sup.cpp select-best-zs-tot.cpp slist.cpp slist.h utilities2.cpp utilities2.h seks/ seqPlotter: symbolic link to `seqplotter' seqdoc/ seqdoc_v1.0.pl seqdoc_v1.2.pl seqext/ seqplotter/ sequencePCTool/ sequencepctool: symbolic link to `sequencePCTool' sequerome/ sewer: symbolic link to `SeWeR' signature/ signetview/ sigpred/ simplegrid/ sitefind/ SiteFind.zip slim/ slritools/ sms2/ sms: symbolic link to `SMS' sna/ SNA-1.0.tar.gz SNA.tar.gz sneaser/ HSapiens-nr.tar.gz genes-UCSC.tar.gz sneaser-updated.zip sneaser.zip snp-tools-excel/ snpsel/ KIAA0960.zip KIAA1754L.zip SNPsel.doc SNPsel.pdf SNPsel.txt SNPsel.zip SNPsel_KIAA0960.doc SNPsel_KIAA0960.pdf.filepart SNPsel_Source.zip socr/ softwaretesting/ somsvd/ spadeweb/ spatkin/ spider/ spms: symbolic link to `SPMS' squiki/ ssake/ ssake_v3-0.tar.gz ssake_v3-2-1-tar.gz ssake_v3-2.tar.gz ssake_v3-2_current.tar.gz ssml/ sspred/ sstu: symbolic link to `sStu' stanley/ stemnet/ storehere/ strainer/ Strainer-0.9.3b-src.jar Strainer-0.9.3b.jar Strainer-0.9.4b-src.jar Strainer-0.9.4b.jar strainer-r19.jar strainer-r23.jar strap/ hallo.tar.gz straputils/ structurekit/ superimposer/ supermarket/ surpresi: symbolic link to `SurpResi' svdfuzzyk/ ClusteringCode.tar.gz sweblast/ SWeBLAST.zip examples.zip swift/ sysbio/ tagsnper/ taxinspector/ TaxInspectorInstaller_0.1b3.jar taxonomy/ tbdtdb/ texmed/ README.txt texmed-2.0.6.tar.gz texmed-2.0.7.tar.gz textknowledge/ test thailand/ thesilverlining/ tpe-lfb/ trabas/ tracegd/ tracegd1.0.zip traceviewer/ trl/ troll/ tutorial/ ucd-medicago/ unidplot/ UniDPlot_Mac.zip UniDPlot_Mac_1.2.1.zip UniDPlot_Win.zip UniDPlot_Win_1.2.1.zip unigenedlst: symbolic link to `UniGeneDLST' vear/ virusbanker/ visual/ vlinux/ 2.0a2/ VLinux_2.0.i686-0.0.8.iso Readme.txt latest: symbolic link to `2.0a2' vlinux.iso volcanicworm/ wasabi: symbolic link to `Wasabi' wax: symbolic link to `WAX' wcurve/ html.tar.gz webfog/ fog.zip wikiposon/ bin/ conf/ data/ attic/ classification/ class/ class1/ ltr_rt/ copia/ definition/ general/ news_archives/ te/ protein/ structural_group/ playground/ species/ plant/ cache/ 0/ 1/ 2/ 3/ 4/ 5/ 6/ 7/ 8/ 9/ a/ b/ c/ d/ e/ f/ index/ locks/ media/ classification/ class/ class1/ ltr_rt/ copia/ general/ wiki/ meta/ classification/ class/ class1/ ltr_rt/ copia/ bare/ class2/ class3/ definition/ general/ news_archives/ te/ protein/ structural_group/ playground/ species/ plant/ wiki/ pages/ classification/ class/ class1/ ltr_rt/ copia/ bare/ gypsy/ non_ltr_rt/ class2/ class3/ definition/ general/ news_archives/ te/ protein/ structural_group/ playground/ species/ plant/ wiki/ inc/ auth/ basic.class.php ldap.class.php mysql.class.php pgsql.class.php plain.class.php punbb.class.php geshi/ actionscript-french.php actionscript.php ada.php apache.php applescript.php asm.php asp.php autoit.php bash.php blitzbasic.php bnf.php c.php c_mac.php caddcl.php cadlisp.php cfdg.php cfm.php cpp.php csharp.php css-gen.cfg css.php d.php delphi.php diff.php div.php dos.php eiffel.php fortran.php freebasic.php gml.php groovy.php html4strict.php idl.php ini.php inno.php io.php java.php java5.php javascript.php latex.php lisp.php lua.php matlab.php mirc.php mpasm.php mysql.php nsis.php objc.php ocaml-brief.php ocaml.php oobas.php oracle8.php pascal.php perl.php php-brief.php php.php python.php qbasic.php reg.php robots.php ruby.php sas.php scheme.php sdlbasic.php smalltalk.php smarty.php sql.php tcl.php text.php thinbasic.php tsql.php vb.php vbnet.php vhdl.php visualfoxpro.php winbatch.php xml.php lang/ ar/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt wordblock.txt ca/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt revisions.txt searchpage.txt showrev.txt wordblock.txt cs/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt da/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt de/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt el/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt en/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt stopwords_OLD.txt.OLD subscribermail.txt updateprofile.txt wordblock.txt eo/ backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt preview.txt read.txt recent.txt register.txt revisions.txt searchpage.txt showrev.txt wordblock.txt es/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt et/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt eu/ admin.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt revisions.txt searchpage.txt showrev.txt wordblock.txt fi/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt revisions.txt searchpage.txt showrev.txt subscribermail.txt wordblock.txt fo/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt fr/ admin.txt admin_acl.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt he/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt draft.txt edit.txt editrev.txt index.txt install.html lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt pwconfirm.txt read.txt recent.txt register.txt registermail.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt hr/ admin.txt backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt resendpwd.txt revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt updateprofile.txt wordblock.txt hu/ backlinks.txt conflict.txt denied.txt diff.txt edit.txt editrev.txt index.txt lang.php locked.txt login.txt mailtext.txt newpage.txt norev.txt password.txt preview.txt read.txt recent.txt register.txt revisions.txt searchpage.txt showrev.txt stopwords.txt wordblock.txt id/ revisions.txt searchpage.txt showrev.txt stopwords.txt subscribermail.txt wordblock.txt it/ ja/ ko/ lt/ lv/ nl/ no/ pl/ pt-br/ pt/ ro/ ru/ sk/ sl/ sr/ sv/ tr/ uk/ vi/ zh-tw/ zh/ parser/ lib/ exe/ ajax.php css.php detail.php fetch.php indexer.php js.php mediamanager.php spellcheck.php images/ arrow_down.gif arrow_up.gif at.gif blank.gif del.png diff.png edit.gif error.png fileicons/ bz2.png conf.png deb.png doc.png file.png gif.png gz.png htm.png html.png index.php jpeg.png jpg.png odc.png odf.png odg.png odi.png odp.png ods.png odt.png pdf.png png.png ppt.png ps.png rpm.png rtf.png swf.png sxc.png sxd.png sxi.png sxw.png tar.png tgz.png txt.png xls.png xml.png zip.png history.png info.png interwiki.png interwiki/ amazon.de.gif amazon.gif amazon.uk.gif bug.gif coral.gif doku.gif google.gif meatball.gif phpfn.gif sb.gif wiki.gif wp.gif wpde.gif wpmeta.gif larger.gif list-minus.gif list-plus.gif loading.gif magnifier.png minus.gif notify.png pencil.png plus.gif smaller.gif smileys/ delete.gif fixme.gif icon_arrow.gif icon_biggrin.gif icon_confused.gif icon_cool.gif icon_cry.gif icon_doubt.gif icon_doubt2.gif icon_eek.gif icon_evil.gif icon_exclaim.gif icon_frown.gif icon_fun.gif icon_idea.gif icon_kaddi.gif icon_lol.gif icon_mrgreen.gif icon_neutral.gif icon_question.gif icon_razz.gif icon_redface.gif icon_rolleyes.gif icon_sad.gif icon_silenced.gif icon_smile.gif icon_smile2.gif icon_surprised.gif icon_twisted.gif icon_wink.gif success.png toolbar/ bold.png chars.png h1.png h2.png h3.png h4.png h5.png hr.png image.png italic.png link.png linkextern.png mono.png ol.png sig.png smiley.png spellcheck.png spellnoerr.png spellstop.png spellwait.gif strike.png ul.png underline.png trash.png wrap.gif plugins/ acl/ admin.php lang/ ar/ intro.txt lang.php ca/ intro.txt lang.php cs/ intro.txt lang.php da/ intro.txt lang.php de/ intro.txt lang.php el/ intro.txt lang.php en/ intro.txt lang.php es/ intro.txt lang.php et/ intro.txt lang.php eu/ intro.txt fi/ intro.txt fr/ intro.txt lang.php he/ intro.txt lang.php id/ intro.txt lang.php it/ intro.txt lang.php ja/ intro.txt lang.php lt/ intro.txt lang.php lv/ intro.txt lang.php nl/ intro.txt lang.php no/ intro.txt lang.php pl/ intro.txt lang.php pt/ intro.txt lang.php ru/ intro.txt lang.php sk/ intro.txt lang.php sr/ intro.txt lang.php tr/ intro.txt lang.php uk/ intro.txt lang.php vi/ intro.txt lang.php zh-tw/ intro.txt lang.php zh/ intro.txt lang.php style.css action.php admin.php alphaindex/ manager.dat syntax.php autolink2/ admin.php conf/ default.php metadata.php helper.php lang/ en/ lang.php settings.php manager.dat syntax/ add.php show.php base.php cloud/ COPYING README VERSION style.css syntax.php config/ admin.php lang/ cs/ intro.txt lang.php da/ intro.txt lang.php de/ intro.txt lang.php el/ intro.txt lang.php en/ intro.txt lang.php es/ intro.txt lang.php fr/ intro.txt lang.php he/ intro.txt lang.php it/ intro.txt lang.php ja/ intro.txt lang.php lt/ intro.txt pl/ intro.txt lang.php ru/ intro.txt lang.php uk/ intro.txt lang.php zh/ intro.txt lang.php settings/ config.class.php config.metadata.php extra.class.php style.css contact/ lang/ en/ lang.php script.js syntax.php discussion/ COPYING README VERSION action.php conf/ default.php metadata.php convert.php helper.php images/ date.gif default.gif user.gif lang/ cs/ lang.php settings.php subscribermail.txt de/ lang.php settings.php subscribermail.txt en/ lang.php settings.php subscribermail.txt es/ lang.php settings.php subscribermail.txt fr/ lang.php settings.php subscribermail.txt hu/ settings.php it/ lang.php settings.php subscribermail.txt nl/ lang.php settings.php subscribermail.txt pl/ lang.php settings.php subscribermail.txt pt-br/ lang.php settings.php subscribermail.txt pt/ lang.php settings.php subscribermail.txt ru/ lang.php settings.php subscribermail.txt se/ lang.php sk/ lang.php settings.php subscribermail.txt sl-si/ lang.php zh-tw/ lang.php settings.php subscribermail.txt zh/ lang.php settings.php subscribermail.txt print.css script.js style.css syntax/ comments.php gravatar.php threads.php feed/ COPYING README VERSION feed.php images/ rss_icon.png style.css syntax.php importoldchangelog/ action.php info/ syntax.php lang/ note/ images/ important.png note.png tip.png warning.png style.css syntax.php pagelist/ COPYING README VERSION conf/ default.php metadata.php helper.php lang/ de/ lang.php settings.php en/ lang.php settings.php style.css syntax.php pagemove/ admin.php lang/ de/ lang.php pagemove.txt en/ lang.php pagemove.txt fr/ lang.php pagemove.txt lv/ lang.php pagemove.txt nl/ lang.php pagemove.txt ru/ lang.php pagemove.txt sl/ lang.php pagemove.txt zh/ lang.php pagemove.txt manager.dat plugin/ admin.php inc/ zip.lib.php lang/ cs/ admin_plugin.txt lang.php da/ admin_plugin.txt lang.php de/ admin_plugin.txt lang.php el/ admin_plugin.txt lang.php en/ admin_plugin.txt lang.php es/ admin_plugin.txt lang.php fr/ admin_plugin.txt lang.php he/ admin_plugin.txt lang.php it/ admin_plugin.txt lang.php ja/ admin_plugin.txt lang.php lt/ admin_plugin.txt pl/ admin_plugin.txt lang.php ru/ admin_plugin.txt lang.php sk/ admin_plugin.txt lang.php uk/ admin_plugin.txt lang.php zh/ admin_plugin.txt lang.php style.css pubmed/ syntax.php stats/ syntax.php stopwords.txt syntax.php tmp/ usermanager/ admin.php images/ no_user_edit.png search.png user_edit.png lang/ cs/ add.txt delete.txt edit.txt intro.txt lang.php list.txt da/ add.txt delete.txt edit.txt intro.txt lang.php list.txt de/ add.txt delete.txt edit.txt intro.txt lang.php list.txt el/ add.txt delete.txt edit.txt intro.txt lang.php list.txt en/ add.txt delete.txt edit.txt intro.txt lang.php list.txt es/ add.txt delete.txt edit.txt intro.txt lang.php list.txt fr/ add.txt delete.txt edit.txt intro.txt lang.php list.txt he/ add.txt delete.txt edit.txt intro.txt lang.php list.txt it/ add.txt delete.txt edit.txt intro.txt lang.php list.txt ja/ add.txt delete.txt edit.txt intro.txt lang.php list.txt lt/ add.txt delete.txt edit.txt intro.txt lang.php list.txt lv/ add.txt delete.txt edit.txt intro.txt lang.php list.txt pl/ add.txt delete.txt edit.txt intro.txt lang.php list.txt ru/ add.txt delete.txt edit.txt intro.txt lang.php list.txt sk/ add.txt delete.txt edit.txt intro.txt lang.php list.txt uk/ add.txt delete.txt edit.txt intro.txt lang.php list.txt zh-tw/ add.txt delete.txt edit.txt intro.txt lang.php list.txt zh/ add.txt delete.txt edit.txt intro.txt lang.php list.txt style.css scripts/ ajax.js cookie.js domLib.js domTT.js edit.js events.js media.js pngbehavior.htc script.js spellcheck.js tw-sack.js styles/ feed.css spellcheck.css style.css tpl/ default/ design.css design.css.PB detail.php footer.html images/ bullet.gif button-cc.gif button-css.png button-donate.gif button-dw.png button-php.gif button-rss.png button-xhtml.png buttonshadow.png closed.gif favicon.ico inputshadow.png link_icon.gif mail_icon.gif open.gif tocdot2.gif windows.gif layout.css main.php main.php.PB media.css mediamanager.php print.css rtl.css style.ini sidebar/ design.css detail.php footer.html images/ Thumbs.db bullet.gif button-cc.gif button-css.png button-donate.gif button-dw.png button-php.gif button-rss.png button-xhtml.png closed.gif favicon.ico interwiki.png link_icon.gif logo_bioinfo1.png logo_bioinfo2.png mail_icon.gif open.gif sidebar-border.gif tocdot2.gif windows.gif layout.css main.php media.php mediaedit.php mediaref.php print.css rtl.css sidebar.css sidebar_print.css style.ini tplfn_sidebar.php winblast: symbolic link to `WinBLAST' wrair/ genecite.zip genecite/ GeneCite.jar GeneCiteUserGuide.doc SampleData1.txt SampleDatasymbol.txt genes.txt pathwaydatabaseGC1.ldb pathwaydatabaseGC1.mdb terms.txt testUnists.txt x-chem/ xml2mat/ XML4MAT.zip yamap/ yapp/ readme yapp.tar.gz yourlabdata/ zEST/ zest: symbolic link to `zEST' zps/