# Makefile.in generated automatically by automake 1.4-p4 from Makefile.am

# Copyright (C) 1994, 1995-8, 1999 Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.


SHELL = /bin/sh

srcdir = .
top_srcdir = .

prefix = /usr
exec_prefix = ${prefix}

bindir = ${exec_prefix}/bin
sbindir = ${exec_prefix}/sbin
libexecdir = ${exec_prefix}/libexec
datadir = ${prefix}/share
sysconfdir = ${prefix}/etc
sharedstatedir = ${prefix}/com
localstatedir = ${prefix}/var
libdir = ${exec_prefix}/lib
infodir = ${prefix}/info
mandir = ${prefix}/man
includedir = ${prefix}/include
oldincludedir = /usr/include

DESTDIR =

pkgdatadir = $(datadir)/populations
pkglibdir = $(libdir)/populations
pkgincludedir = $(includedir)/populations

top_builddir = .

ACLOCAL = aclocal
AUTOCONF = autoconf
AUTOMAKE = automake
AUTOHEADER = autoheader

INSTALL = /usr/bin/install -c
INSTALL_PROGRAM = ${INSTALL} $(AM_INSTALL_PROGRAM_FLAGS)
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_SCRIPT = ${INSTALL}
transform = s,x,x,

NORMAL_INSTALL = :
PRE_INSTALL = :
POST_INSTALL = :
NORMAL_UNINSTALL = :
PRE_UNINSTALL = :
POST_UNINSTALL = :
host_alias = 
host_triplet = i686-pc-linux-gnu
CC = gcc
CXX = g++
HAVE_LIB = @HAVE_LIB@
ISODATE = 2005-03-23
LIB = @LIB@
LTLIB = @LTLIB@
MAKEINFO = makeinfo
PACKAGE = populations
VERSION = 0.1.0

bin_PROGRAMS = populations
populations_SOURCES = chaineficpop.cpp population.cpp metapop.cpp strucpop.cpp individu.cpp distgnt.cpp arbre.cpp arbreplus.cpp locus.cpp fstat.cpp couleur.cpp jeupop.cpp jeupopexp.cpp applpop.cpp applications.cpp matrices.cpp vecteurs.cpp applpopulations.cpp allele.cpp main.cpp populations.1 xmalloc.c system.h aclocal.m4 getopt.c getopt1.c getopt.h

#  uncomment the following if populations requires the math library
#populations_LDADD=-lm

EXTRA_DIST = populations.lsm.in #NAME.texinfo populations.spec.in

#  if you write a self-test script named `chk', uncomment the
#  following and add `chk' to the EXTRA_DIST list
#TESTS=chk

#  build and install the .info pages
info_TEXINFOS = populations.texinfo
populations_TEXINFOS = gpl.texinfo

#  install the man pages
man_MANS = populations.1
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
CONFIG_HEADER = config.h
CONFIG_CLEAN_FILES =  populations.lsm populations.spec
PROGRAMS =  $(bin_PROGRAMS)


DEFS = -DHAVE_CONFIG_H -I. -I$(srcdir) -I.
CPPFLAGS = 
LDFLAGS = 
LIBS = 
populations_OBJECTS =  chaineficpop.o population.o metapop.o strucpop.o \
individu.o distgnt.o arbre.o arbreplus.o locus.o fstat.o couleur.o \
jeupop.o jeupopexp.o applpop.o applications.o matrices.o vecteurs.o \
applpopulations.o allele.o main.o xmalloc.o getopt.o getopt1.o
populations_LDADD = $(LDADD)
populations_DEPENDENCIES = 
populations_LDFLAGS = 
CXXFLAGS = -g -O2
CXXCOMPILE = $(CXX) $(DEFS) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS)
CXXLD = $(CXX)
CXXLINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(LDFLAGS) -o $@
CFLAGS = -g -O2
COMPILE = $(CC) $(DEFS) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
CCLD = $(CC)
LINK = $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(LDFLAGS) -o $@
TEXI2DVI = texi2dvi
INFO_DEPS = populations.info
DVIS = populations.dvi
TEXINFOS = populations.texinfo
man1dir = $(mandir)/man1
MANS = $(man_MANS)

NROFF = nroff
DIST_COMMON =  README $(populations_TEXINFOS) ./stamp-h.in AUTHORS \
COPYING ChangeLog INSTALL Makefile.am Makefile.in NEWS acinclude.m4 \
aclocal.m4 config.guess config.h.in config.sub configure configure.in \
install-sh missing mkinstalldirs populations.lsm.in populations.spec.in \
texinfo.tex


DISTFILES = $(DIST_COMMON) $(SOURCES) $(HEADERS) $(TEXINFOS) $(EXTRA_DIST)

TAR = tar
GZIP_ENV = --best
DEP_FILES =  .deps/allele.P .deps/applications.P .deps/applpop.P \
.deps/applpopulations.P .deps/arbre.P .deps/arbreplus.P \
.deps/chaineficpop.P .deps/couleur.P .deps/distgnt.P .deps/fstat.P \
.deps/getopt.P .deps/getopt1.P .deps/individu.P .deps/jeupop.P \
.deps/jeupopexp.P .deps/locus.P .deps/main.P .deps/matrices.P \
.deps/metapop.P .deps/population.P .deps/strucpop.P .deps/vecteurs.P \
.deps/xmalloc.P
SOURCES = $(populations_SOURCES)
OBJECTS = $(populations_OBJECTS)

all: all-redirect
.SUFFIXES:
.SUFFIXES: .S .c .cpp .dvi .info .o .ps .s .texi .texinfo .txi
$(srcdir)/Makefile.in: Makefile.am $(top_srcdir)/configure.in $(ACLOCAL_M4) 
	cd $(top_srcdir) && $(AUTOMAKE) --gnu Makefile

Makefile: $(srcdir)/Makefile.in  $(top_builddir)/config.status $(BUILT_SOURCES)
	cd $(top_builddir) \
	  && CONFIG_FILES=$@ CONFIG_HEADERS= $(SHELL) ./config.status

$(ACLOCAL_M4):  configure.in  acinclude.m4
	cd $(srcdir) && $(ACLOCAL)

config.status: $(srcdir)/configure.in $(CONFIG_STATUS_DEPENDENCIES)
	$(SHELL) ./config.status --recheck
$(srcdir)/configure: $(srcdir)/configure.in $(ACLOCAL_M4) $(CONFIGURE_DEPENDENCIES)
	cd $(srcdir) && $(AUTOCONF)

config.h: stamp-h
	@if test ! -f $@; then \
		rm -f stamp-h; \
		$(MAKE) stamp-h; \
	else :; fi
stamp-h: $(srcdir)/config.h.in $(top_builddir)/config.status
	cd $(top_builddir) \
	  && CONFIG_FILES= CONFIG_HEADERS=config.h \
	     $(SHELL) ./config.status
	@echo timestamp > stamp-h 2> /dev/null
$(srcdir)/config.h.in: $(srcdir)/stamp-h.in
	@if test ! -f $@; then \
		rm -f $(srcdir)/stamp-h.in; \
		$(MAKE) $(srcdir)/stamp-h.in; \
	else :; fi
$(srcdir)/stamp-h.in: $(top_srcdir)/configure.in $(ACLOCAL_M4) 
	cd $(top_srcdir) && $(AUTOHEADER)
	@echo timestamp > $(srcdir)/stamp-h.in 2> /dev/null

mostlyclean-hdr:

clean-hdr:

distclean-hdr:
	-rm -f config.h

maintainer-clean-hdr:
populations.lsm: $(top_builddir)/config.status populations.lsm.in
	cd $(top_builddir) && CONFIG_FILES=$@ CONFIG_HEADERS= $(SHELL) ./config.status
populations.spec: $(top_builddir)/config.status populations.spec.in
	cd $(top_builddir) && CONFIG_FILES=$@ CONFIG_HEADERS= $(SHELL) ./config.status

mostlyclean-binPROGRAMS:

clean-binPROGRAMS:
	-test -z "$(bin_PROGRAMS)" || rm -f $(bin_PROGRAMS)

distclean-binPROGRAMS:

maintainer-clean-binPROGRAMS:

install-binPROGRAMS: $(bin_PROGRAMS)
	@$(NORMAL_INSTALL)
	$(mkinstalldirs) $(DESTDIR)$(bindir)
	@list='$(bin_PROGRAMS)'; for p in $$list; do \
	  if test -f $$p; then \
	    echo "  $(INSTALL_PROGRAM) $$p $(DESTDIR)$(bindir)/`echo $$p|sed 's/$(EXEEXT)$$//'|sed '$(transform)'|sed 's/$$/$(EXEEXT)/'`"; \
	     $(INSTALL_PROGRAM) $$p $(DESTDIR)$(bindir)/`echo $$p|sed 's/$(EXEEXT)$$//'|sed '$(transform)'|sed 's/$$/$(EXEEXT)/'`; \
	  else :; fi; \
	done

uninstall-binPROGRAMS:
	@$(NORMAL_UNINSTALL)
	list='$(bin_PROGRAMS)'; for p in $$list; do \
	  rm -f $(DESTDIR)$(bindir)/`echo $$p|sed 's/$(EXEEXT)$$//'|sed '$(transform)'|sed 's/$$/$(EXEEXT)/'`; \
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.s.o:
	$(COMPILE) -c $<

.S.o:
	$(COMPILE) -c $<

mostlyclean-compile:
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clean-compile:

distclean-compile:
	-rm -f *.tab.c

maintainer-clean-compile:

populations: $(populations_OBJECTS) $(populations_DEPENDENCIES)
	@rm -f populations
	$(CXXLINK) $(populations_LDFLAGS) $(populations_OBJECTS) $(populations_LDADD) $(LIBS)
.cpp.o:
	$(CXXCOMPILE) -c $<

populations.info: populations.texinfo $(populations_TEXINFOS)
populations.dvi: populations.texinfo $(populations_TEXINFOS)


DVIPS = dvips

.texi.info:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`

.texi.dvi:
	TEXINPUTS=.:$$TEXINPUTS \
	  MAKEINFO='$(MAKEINFO) -I $(srcdir)' $(TEXI2DVI) $<

.texi:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`

.texinfo.info:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`

.texinfo:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`

.texinfo.dvi:
	TEXINPUTS=.:$$TEXINPUTS \
	  MAKEINFO='$(MAKEINFO) -I $(srcdir)' $(TEXI2DVI) $<

.txi.info:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`

.txi.dvi:
	TEXINPUTS=.:$$TEXINPUTS \
	  MAKEINFO='$(MAKEINFO) -I $(srcdir)' $(TEXI2DVI) $<

.txi:
	@cd $(srcdir) && rm -f $@ $@-[0-9] $@-[0-9][0-9]
	cd $(srcdir) \
	  && $(MAKEINFO) `echo $< | sed 's,.*/,,'`
.dvi.ps:
	$(DVIPS) $< -o $@

install-info-am: $(INFO_DEPS)
	@$(NORMAL_INSTALL)
	$(mkinstalldirs) $(DESTDIR)$(infodir)
	@list='$(INFO_DEPS)'; \
	for file in $$list; do \
	  d=$(srcdir); \
	  for ifile in `cd $$d && echo $$file $$file-[0-9] $$file-[0-9][0-9]`; do \
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	      $(INSTALL_DATA) $$d/$$ifile $(DESTDIR)$(infodir)/$$ifile; \
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	  done; \
	done
	@$(POST_INSTALL)
	@if $(SHELL) -c 'install-info --version | sed 1q | fgrep -s -v -i debian' >/dev/null 2>&1; then \
	  list='$(INFO_DEPS)'; \
	  for file in $$list; do \
	    echo " install-info --info-dir=$(DESTDIR)$(infodir) $(DESTDIR)$(infodir)/$$file";\
	    install-info --info-dir=$(DESTDIR)$(infodir) $(DESTDIR)$(infodir)/$$file || :;\
	  done; \
	else : ; fi

uninstall-info:
	$(PRE_UNINSTALL)
	@if $(SHELL) -c 'install-info --version | sed 1q | fgrep -s -v -i debian' >/dev/null 2>&1; then \
	  ii=yes; \
	else ii=; fi; \
	list='$(INFO_DEPS)'; \
	for file in $$list; do \
	  test -z "$$ii" \
	    || install-info --info-dir=$(DESTDIR)$(infodir) --remove $$file; \
	done
	@$(NORMAL_UNINSTALL)
	list='$(INFO_DEPS)'; \
	for file in $$list; do \
	  (cd $(DESTDIR)$(infodir) && rm -f $$file $$file-[0-9] $$file-[0-9][0-9]); \
	done

dist-info: $(INFO_DEPS)
	list='$(INFO_DEPS)'; \
	for base in $$list; do \
	  d=$(srcdir); \
	  for file in `cd $$d && eval echo $$base*`; do \
	    test -f $(distdir)/$$file \
	    || ln $$d/$$file $(distdir)/$$file 2> /dev/null \
	    || cp -p $$d/$$file $(distdir)/$$file; \
	  done; \
	done

mostlyclean-aminfo:
	-rm -f populations.aux populations.cp populations.cps populations.dvi \
	  populations.fn populations.fns populations.ky populations.kys \
	  populations.ps populations.log populations.pg populations.toc \
	  populations.tp populations.tps populations.vr populations.vrs \
	  populations.op populations.tr populations.cv populations.cn

clean-aminfo:

distclean-aminfo:

maintainer-clean-aminfo:
	cd $(srcdir) && for i in $(INFO_DEPS); do \
	  rm -f $$i; \
	  if test "`echo $$i-[0-9]*`" != "$$i-[0-9]*"; then \
	    rm -f $$i-[0-9]*; \
	  fi; \
	done

install-man1:
	$(mkinstalldirs) $(DESTDIR)$(man1dir)
	@list='$(man1_MANS)'; \
	l2='$(man_MANS)'; for i in $$l2; do \
	  case "$$i" in \
	    *.1*) list="$$list $$i" ;; \
	  esac; \
	done; \
	for i in $$list; do \
	  if test -f $(srcdir)/$$i; then file=$(srcdir)/$$i; \
	  else file=$$i; fi; \
	  ext=`echo $$i | sed -e 's/^.*\\.//'`; \
	  inst=`echo $$i | sed -e 's/\\.[0-9a-z]*$$//'`; \
	  inst=`echo $$inst | sed '$(transform)'`.$$ext; \
	  echo " $(INSTALL_DATA) $$file $(DESTDIR)$(man1dir)/$$inst"; \
	  $(INSTALL_DATA) $$file $(DESTDIR)$(man1dir)/$$inst; \
	done

uninstall-man1:
	@list='$(man1_MANS)'; \
	l2='$(man_MANS)'; for i in $$l2; do \
	  case "$$i" in \
	    *.1*) list="$$list $$i" ;; \
	  esac; \
	done; \
	for i in $$list; do \
	  ext=`echo $$i | sed -e 's/^.*\\.//'`; \
	  inst=`echo $$i | sed -e 's/\\.[0-9a-z]*$$//'`; \
	  inst=`echo $$inst | sed '$(transform)'`.$$ext; \
	  echo " rm -f $(DESTDIR)$(man1dir)/$$inst"; \
	  rm -f $(DESTDIR)$(man1dir)/$$inst; \
	done
install-man: $(MANS)
	@$(NORMAL_INSTALL)
	$(MAKE) $(AM_MAKEFLAGS) install-man1
uninstall-man:
	@$(NORMAL_UNINSTALL)
	$(MAKE) $(AM_MAKEFLAGS) uninstall-man1

tags: TAGS

ID: $(HEADERS) $(SOURCES) $(LISP)
	list='$(SOURCES) $(HEADERS)'; \
	unique=`for i in $$list; do echo $$i; done | \
	  awk '    { files[$$0] = 1; } \
	       END { for (i in files) print i; }'`; \
	here=`pwd` && cd $(srcdir) \
	  && mkid -f$$here/ID $$unique $(LISP)

TAGS:  $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) $(LISP)
	tags=; \
	here=`pwd`; \
	list='$(SOURCES) $(HEADERS)'; \
	unique=`for i in $$list; do echo $$i; done | \
	  awk '    { files[$$0] = 1; } \
	       END { for (i in files) print i; }'`; \
	test -z "$(ETAGS_ARGS)config.h.in$$unique$(LISP)$$tags" \
	  || (cd $(srcdir) && etags $(ETAGS_ARGS) $$tags config.h.in $$unique $(LISP) -o $$here/TAGS)

mostlyclean-tags:

clean-tags:

distclean-tags:
	-rm -f TAGS ID

maintainer-clean-tags:

distdir = $(PACKAGE)-$(VERSION)
top_distdir = $(distdir)

# This target untars the dist file and tries a VPATH configuration.  Then
# it guarantees that the distribution is self-contained by making another
# tarfile.
distcheck: dist
	-rm -rf $(distdir)
	GZIP=$(GZIP_ENV) $(TAR) zxf $(distdir).tar.gz
	mkdir $(distdir)/=build
	mkdir $(distdir)/=inst
	dc_install_base=`cd $(distdir)/=inst && pwd`; \
	cd $(distdir)/=build \
	  && ../configure --srcdir=.. --prefix=$$dc_install_base \
	  && $(MAKE) $(AM_MAKEFLAGS) \
	  && $(MAKE) $(AM_MAKEFLAGS) dvi \
	  && $(MAKE) $(AM_MAKEFLAGS) check \
	  && $(MAKE) $(AM_MAKEFLAGS) install \
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	-rm -rf $(distdir)
	@banner="$(distdir).tar.gz is ready for distribution"; \
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distdir: $(DISTFILES)
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	mkdir $(distdir)
	-chmod 777 $(distdir)
	here=`cd $(top_builddir) && pwd`; \
	top_distdir=`cd $(distdir) && pwd`; \
	distdir=`cd $(distdir) && pwd`; \
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	  if test -d $$d/$$file; then \
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DEPS_MAGIC := $(shell mkdir .deps > /dev/null 2>&1 || :)

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maintainer-clean-depend:

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%.lo: %.c
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%.o: %.cpp
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%.lo: %.cpp
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info: info-am
dvi-am: $(DVIS)
dvi: dvi-am
check-am: all-am
check: check-am
installcheck-am:
installcheck: installcheck-am
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install-exec-am: install-binPROGRAMS
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install-data-am: install-info-am install-man
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install-am: all-am
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installdirs:
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		$(DESTDIR)$(mandir)/man1


mostlyclean-generic:

clean-generic:

distclean-generic:
	-rm -f Makefile $(CONFIG_CLEAN_FILES)
	-rm -f config.cache config.log stamp-h stamp-h[0-9]*

maintainer-clean-generic:
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		mostlyclean-compile mostlyclean-aminfo mostlyclean-tags \
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mostlyclean: mostlyclean-am

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clean: clean-am

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check-am installcheck-am installcheck all-recursive-am install-exec-am \
install-exec install-data-am install-data install-am install \
uninstall-am uninstall all-redirect all-am all installdirs \
mostlyclean-generic distclean-generic clean-generic \
maintainer-clean-generic clean mostlyclean distclean maintainer-clean


# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT:
