| Pathway ID |
Pathway Common Name
|
Number of genes in Pathway (in affy 22k dataset) |
|
Pathway_6
|
(deoxy)ribose phosphate degradation
|
12
|
|
Pathway_7
|
13-LOX and 13-HPL pathway
|
8
|
|
Pathway_10
|
de novo biosynthesis of purine nucleotides
|
14
|
|
Pathway_12
|
trans-zeatin biosynthesis
|
8
|
|
Pathway_16
|
Calvin cycle
|
34
|
|
Pathway_21
|
IAA biosynthesis I
|
9
|
|
Pathway_26
|
NAD/NADH phosphorylation and dephosphorylation
|
31
|
|
Pathway_29
|
SAM cycle
|
8
|
|
Pathway_30
|
TCA cycle
|
33
|
|
Pathway_33
|
UDP-D-xylose biosynthesis
|
10
|
|
Pathway_38
|
UDP-galactose biosynthesis
|
8
|
|
Pathway_39
|
UDP-glucose biosynthesis
|
11
|
|
Pathway_44
|
acetyl-CoA biosynthesis
|
16
|
|
Pathway_45
|
acrylonitrile degradation
|
8
|
|
Pathway_49
|
acyl-CoA thioesterase pathway
|
12
|
|
Pathway_51
|
aerobic respiration
|
60
|
|
Pathway_52
|
aerobic respiration -- alternative oxidase pathway
|
37
|
|
Pathway_57
|
aldoxime degradation
|
8
|
|
Pathway_58
|
ammonia assimilation cycle
|
10
|
|
Pathway_60
|
arginine biosynthesis I
|
8
|
|
Pathway_61
|
arginine biosynthesis II
|
9
|
|
Pathway_66
|
ascorbate glutathione cycle
|
16
|
|
Pathway_68
|
asparagine biosynthesis II
|
10
|
|
Pathway_72
|
branched-chain α-keto acid dehydrogenase complex
|
9
|
|
Pathway_77
|
cardiolipin biosynthesis
|
11
|
|
Pathway_78
|
carotenoid biosynthesis
|
11
|
|
Pathway_79
|
cellulose biosynthesis
|
42
|
|
Pathway_84
|
chlorophyllide a biosynthesis
|
16
|
|
Pathway_85
|
cholesterol biosynthesis
|
10
|
|
Pathway_87
|
choline biosynthesis III
|
16
|
|
Pathway_88
|
chorismate biosynthesis
|
12
|
|
Pathway_95
|
cyanate degradation
|
17
|
|
Pathway_97
|
cysteine biosynthesis
|
11
|
|
Pathway_98
|
cytokinins 7-N-glucoside biosynthesis
|
77
|
|
Pathway_99
|
cytokinins 9-N-glucoside biosynthesis
|
77
|
|
Pathway_101
|
cytokinins-O-glucoside biosynthesis
|
77
|
|
Pathway_103
|
de novo biosynthesis of pyrimidine deoxyribonucleotides
|
14
|
|
Pathway_105
|
dolichyl-diphosphooligosaccharide biosynthesis
|
9
|
|
Pathway_108
|
ethylene biosynthesis from methionine
|
27
|
|
Pathway_110
|
fatty acid β-oxidation I
|
19
|
|
Pathway_117
|
flavonoid biosynthesis
|
17
|
|
Pathway_118
|
flavonol biosynthesis
|
9
|
|
Pathway_119
|
folate polyglutamylation I
|
11
|
|
Pathway_121
|
folate transformations
|
16
|
|
Pathway_122
|
formylTHF biosynthesis
|
17
|
|
Pathway_124
|
galactose degradation I
|
27
|
|
Pathway_125
|
galactose degradation II
|
17
|
|
Pathway_126
|
geranyldiphosphate biosynthesis
|
8
|
|
Pathway_127
|
geranylgeranyldiphosphate biosynthesis I
|
14
|
|
Pathway_128
|
geranylgeranyldiphosphate biosynthesis II
|
21
|
|
Pathway_129
|
gibberellin biosynthesis I
|
8
|
|
Pathway_131
|
gibberellin biosynthesis III
|
9
|
|
Pathway_133
|
gluconeogenesis
|
31
|
|
Pathway_134
|
glucosinolate biosynthesis from homomethionine
|
9
|
|
Pathway_145
|
glutathione redox reactions
|
11
|
|
Pathway_147
|
glycine biosynthesis
|
11
|
|
Pathway_148
|
glycine degradation
|
9
|
|
Pathway_152
|
glycolysis I
|
52
|
|
Pathway_153
|
glycolysis II
|
49
|
|
Pathway_154
|
glyoxylate cycle
|
13
|
|
Pathway_155
|
heme biosynthesis
|
8
|
|
Pathway_156
|
histidine biosynthesis
|
8
|
|
Pathway_158
|
homogalacturonan biosynthesis
|
24
|
|
Pathway_159
|
homogalacturonan degradation
|
129
|
|
Pathway_163
|
isoleucine biosynthesis
|
9
|
|
Pathway_164
|
isoleucine degradation
|
16
|
|
Pathway_165
|
jasmonic acid biosynthesis
|
18
|
|
Pathway_166
|
kaempferol glucoside biosynthesis
|
16
|
|
Pathway_167
|
lactose degradation
|
17
|
|
Pathway_168
|
leucine biosynthesis
|
12
|
|
Pathway_169
|
leucine degradation
|
15
|
|
Pathway_176
|
lysine biosynthesis
|
12
|
|
Pathway_178
|
lysine degradation II
|
8
|
|
Pathway_179
|
mannitol degradation
|
12
|
|
Pathway_180
|
mannose degradation
|
8
|
|
Pathway_181
|
methionine biosynthesis
|
10
|
|
Pathway_183
|
methionine salvage pathway
|
22
|
|
Pathway_184
|
methylerythritol phosphate pathway
|
11
|
|
Pathway_185
|
methylglyoxal degradation
|
12
|
|
Pathway_186
|
mevalonate pathway
|
10
|
|
Pathway_190
|
nitrate assimilation pathway
|
9
|
|
Pathway_191
|
non-oxidative branch of the pentose phosphate pathway
|
12
|
|
Pathway_192
|
oxidative branch of the pentose phosphate pathway
|
16
|
|
Pathway_196
|
phenylalanine biosynthesis II
|
17
|
|
Pathway_197
|
phenylpropanoid biosynthesis
|
31
|
|
Pathway_199
|
phospholipases
|
23
|
|
Pathway_200
|
phospholipid biosynthesis
|
29
|
|
Pathway_202
|
photorespiration
|
19
|
|
Pathway_203
|
photosynthesis, light reaction
|
27
|
|
Pathway_214
|
purine nucleotide metabolism
|
21
|
|
Pathway_219
|
pyrimidine nucleotide metabolism
|
14
|
|
Pathway_220
|
pyrimidine salvage pathway
|
9
|
|
Pathway_222
|
removal of superoxide radicals
|
11
|
|
Pathway_223
|
riboflavin and FMN and FAD biosynthesis
|
9
|
|
Pathway_226
|
salvage pathways of purine nucleosides
|
13
|
|
Pathway_233
|
sphingolipid biosynthesis
|
8
|
|
Pathway_235
|
starch biosynthesis
|
17
|
|
Pathway_236
|
starch degradation
|
27
|
|
Pathway_237
|
sterol biosynthesis
|
20
|
|
Pathway_238
|
suberin biosynthesis
|
9
|
|
Pathway_239
|
sucrose biosynthesis
|
18
|
|
Pathway_240
|
sucrose degradation
|
29
|
|
Pathway_241
|
sucrose degradation to ethanol and lactate
|
64
|
|
Pathway_243
|
sulfate reduction
|
8
|
|
Pathway_246
|
superpathway of gluconate degradation
|
12
|
|
Pathway_247
|
tRNA charging pathway
|
26
|
|
Pathway_248
|
tetrahydrofolate biosynthesis
|
15
|
|
Pathway_249
|
tetrapyrrole biosynthesis
|
9
|
|
Pathway_253
|
trans,trans-farnesyl diphosphate biosynthesis
|
8
|
|
Pathway_254
|
trehalose biosynthesis
|
21
|
|
Pathway_256
|
triacylglycerol biosynthesis
|
9
|
|
Pathway_257
|
triacylglycerol degradation
|
69
|
|
Pathway_258
|
tryptophan biosynthesis
|
10
|
|
Pathway_267
|
valine biosynthesis
|
14
|
|
Pathway_268
|
valine degradation
|
18
|