Java Plug-in 1.5.0_14
Using JRE version 1.5.0_14 Java HotSpot(TM) Client VM
User home directory = C:\WINDOWS


----------------------------------------------------
c:   clear console window
f:   finalize objects on finalization queue
g:   garbage collect
h:   display this help message
l:   dump classloader list
m:   print memory usage
o:   trigger logging
p:   reload proxy configuration
q:   hide console
r:   reload policy configuration
s:   dump system and deployment properties
t:   dump thread list
v:   dump thread stack
x:   clear classloader cache
0-5: set trace level to <n>
----------------------------------------------------

Exception in thread "Thread-2" java.lang.NullPointerException
	at sun.plugin.viewer.LifeCycleManager.startAppletPanel(Unknown Source)
	at sun.plugin.viewer.WNetscapePluginObject.startPlugin(Unknown Source)
	at sun.plugin.viewer.WNetscapePluginObject$Initer.run(Unknown Source)
urlImage=jar:file:/D:/erics1ws/JMOL/TUTORIAL/jtat/JmolApplet0.jar!/jmol75x29x8.gif
Jmol applet jmolApplet1__765917075199569__ initializing
Jmol applet jmolApplet1__765917075199569__ initializing
language=en_US
language=en_US
AppletRegistry.checkIn(jmolApplet1__765917075199569__)
AppletRegistry.checkIn(jmolApplet1__765917075199569__)
(C) 2007 Jmol Development
Jmol Version 11.5.39  2008-05-30 15:57
java.vendor:Sun Microsystems Inc.
java.version:1.5.0_14
os.name:Windows 98
memory:1.2/2.0
useCommandThread: false
appletId:jmolApplet1__765917075199569__
(C) 2007 Jmol Development
Jmol Version 11.5.39  2008-05-30 15:57
java.vendor:Sun Microsystems Inc.
java.version:1.5.0_14
os.name:Windows 98
memory:1.2/2.0
useCommandThread: false
appletId:jmolApplet1__765917075199569__
appletDocumentBase=file:/D:/erics1ws/JMOL/TUTORIAL/jtat/jtatdemo/contents/contents.htm
appletCodeBase=file:/D:/erics1ws/JMOL/TUTORIAL/jtat/
appletDocumentBase=file:/D:/erics1ws/JMOL/TUTORIAL/jtat/jtatdemo/contents/contents.htm
appletCodeBase=file:/D:/erics1ws/JMOL/TUTORIAL/jtat/
Microsoft MSIE bug -- http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=5012558 netscape.javascript.JSException
defaults = "Jmol"
backgroundColor = "black"
messageCallback = "processMessageCallback"
pickCallback = "processPickCallback"
MAYSCRIPT missing -- all applet JavaScript calls disabled
Note -- Presence of message callback will disable translation; to enable message translation use jmolSetTranslation(true) prior to jmolApplet()
message +-jmolReadyForJTAT-+;
+-jmolReadyForJTAT-+
defaults = "Jmol"
backgroundColor = "black"
messageCallback = "processMessageCallback"
pickCallback = "processPickCallback"
Note -- Presence of message callback will disable translation; to enable message translation use jmolSetTranslation(true) prior to jmolApplet()
message +-jmolReadyForJTAT-+;
+-jmolReadyForJTAT-+
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/spinprep.spt
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/initjmol.spt

FileManager.openFile(../molecules4all/1d66.pdb) //../molecules4all/1d66.pdb
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/jtatdemo/molecules4all/1d66.pdb
The Resolver thinks Pdb
openFile(../molecules4all/1d66.pdb): 110 ms
ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
ModelSet: autobonding; use  autobond=false  to not generate bonds automatically
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/vreset.spt
isosurface all off   #turns all surfaces off;
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/jtatdemo/contents/initial-view.spt
echo-drag2rotate
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/spin.spt
+-show-zoom-value-next-+
zoom 90.15
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/drag2rotate.spt
FileManager opening file:/D:/erics1ws/JMOL/TUTORIAL/jtat/_sptutil/drag2rotate_bb.spt
Click and drag on the structure to rotate it
