Instructions
This macro is used to generate input files for software in wich genotypes must
be written with numbers instead of letters.
Your input file should look like this:
| MyStudy | Plate | Row | Column | A 529 | SNP002-AG | SNP003-TC |
| MyStudy | - | - | T/G | A/G | T/C | |
| 24600915 | CCB001 | A | 1 | T/T | A/A | T/T |
| 21008259 | CCB001 | A | 2 | T/G | A/G | T/C |
| 41008284 | CCB001 | A | 3 | T/T | A/G | T/C |
| 52500700 | CCB001 | A | 4 | T/G | A/A | T/T |
| 52508700 | CCB001 | A | 5 | G/G | A/G | C/C |
| 42404740 | CCB001 | A | 6 | G/G | A/A | C/C |
| 24609550 | CCB001 | A | 7 | - | A/A | T/C |
| 24611323 | CCB001 | A | 8 | G/G | G/G | T/T |
| 52520520 | CCB001 | B | 1 | T/G | A/G | T/C |
| 23407869 | CCB001 | B | 2 | T/T | G/G | C/C |
| 31008687 | CCB001 | B | 3 | T/G | A/A | T/C |
| AND SO ON... | ||||||
Your output file will look like this for the Translation output for instance:
| MyStudy | Plate | Row | Column | A 529 | SNP002-AG | SNP003-TC |
| MyStudy | - | - | T/G | A/G | T/C | |
| 24600915 | CCB001 | A | 1 | 4 4 | 1 1 | 4 4 |
| 21008259 | CCB001 | A | 2 | 4 3 | 1 3 | 4 2 |
| 41008284 | CCB001 | A | 3 | 4 4 | 1 3 | 4 2 |
| 52500700 | CCB001 | A | 4 | 4 3 | 1 1 | 4 4 |
| 52508700 | CCB001 | A | 5 | 3 3 | 1 3 | 2 2 |
| 42404740 | CCB001 | A | 6 | 3 3 | 1 1 | 2 2 |
| 24609550 | CCB001 | A | 7 | 0 0 | 1 1 | 4 2 |
| 24611323 | CCB001 | A | 8 | 3 3 | 3 3 | 4 4 |
| 52520520 | CCB001 | B | 1 | 4 3 | 1 3 | 4 2 |
| 23407869 | CCB001 | B | 2 | 4 4 | 3 3 | 2 2 |
| 31008687 | CCB001 | B | 3 | 4 3 | 1 1 | 4 2 |
| AND SO ON... | ||||||
Description of the macro.
Download the macro.
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This page was last updated on: July 08, 2005 by Stéphanie Monnier