MBEToolbox 

MATLAB Molecular Biology & Evolution Toolbox

A MATLAB Toolbox Enables Evolutionary Biologists to Analyze and View DNA and Protein Sequences

Cai Laboratory

Postdoctoral Position in Computational/Evolutionary Genomics

A postdoctoral position is available in the laboratory of Dr. James Cai in the Department of Veterinary Integrative Biosciences at the Texas A&M University (College Station, TX). The Cai lab (http://www.genomezoo.net/) focuses on computational research in population genomics and molecular evolution.

Candidates should have obtained a PhD degree in Biology, Bioinformatics, Computer Science, or a related discipline. Programming skills (ideally in Matlab and C) and experience in the application of computational methods to high-throughput genomic data are highly desirable. The successful candidate will work on a variety of projects to develop statistical tests and computational tools to investigate evolutionary processes shaping genome variability patterns. You will also have the opportunity to pursue independent research related to major research themes of the lab.

Interested applicants should submit a CV, a brief (2-3 paragraphs) statement of her/his research interests and experience, and contact information of three references by email to jcai@tamu.edu. Informal inquiries are welcome.



Download latest release - v2.21 (2007-05-18)


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Linux on PC

 
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Installation

  1. Click the download link above and save the installation file to your computer.
  2. Unzip the files in a local directory keeping the structure of sub-directories. A directory called mbetoolbox will be created.
  3. Add the local directory -./mbetoolbox to the MATLAB path.
  4. Run "MBEDEMO.m" or "MBEGUI.m".

System Requirements

MATLAB v6.5 or higher.

Live Demo (interactive flash movie)

Citation

James J Cai, David K Smith, Xuhua Xia, Kwok-yung Yuen.
MBEToolbox: a Matlab toolbox for sequence data analysis in molecular biology and evolution
BMC Bioinformatics 2005, 6:64 [Abstract] [PDF] [Citing Articles] [Pubmed]

James J Cai, David K Smith, Xuhua Xia, Kwok-yung Yuen.
MBEToolbox 2.0: An enhanced version of a MATLAB toolbox for Molecular Biology and Evolution
Evolutionary Bioinformatics Online 2006, 2 189-192 [Abstract] [PDF][Pubmed]

See Also

PGEToolbox : a Matlab toolbox for Population Genetics & Evolution

Feedback Welcomed

Questions and comments regarding MBEToolbox can be sent via e-mail to: jamescai[at]genomezoo.net. I welcome all comments, bug reports, errata, and suggestions for future editions.

Creative Commons License
This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 3.0 United States License.

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Since 26/03/2006