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arli aditya parikesit arli aditya parikesit [Send a message]
Member since: August 24, 2013
I\'m a teaching and research associate in Bioinformatics group, Department of Chemistry, University of Indonesia. I\'m registered as lecturer of pedagogic at Al-Hikmah College. I finished my Phd in Bioinformatics group, University of Leipzig, Germany. In addition, I also work as managing editor of Netsains.com, a popular science portal in Indonesian Language. Work as Bioinformaticians, Educators and popular science writer, but enjoying listen to New Age music, Swimming, and Traveling.
Curriculum vitae

Current address:

Bioinformatics Group Department of Chemistry Faculty of Mathematics and Science University of Indonesia
Jl. Akses UI 16424
Depok, West Java
Indonesia

Education:

PhD in Bioinformatics
Department of Computer Science, University of Leipzig, Germany
2009 - 2012
Msc in Chemistry
Department of Chemistry, University of Indonesia, Indonesia
2005 - 2006
Bsc in Chemistry
Department of Chemistry, University of Indonesia, Indonesia
1998 - 2004

Experience:

Assistant Professor Bioinformatics Group Department of Chemistry Faculty of Mathematics and Science University of Indonesia 2013 - now
Research Assistant Max Planck Society of Mathematics for the Sciences 2012 - 2012
Post master fellow Bioinformatics Group Department of Chemistry Faculty of Mathematics and Science University of Indonesia 2006 - 2008

Skills:

Protein Domain Annotation

Gene Prediction

Molecular Modeling (Homology modeling, docking, and dynamics)

script programming

web development

Activities:

First Priza of Open Source Software writing competition, Indonesian Ministry of Research, 2009

Member of Indonesian Chemical Society (2011 - now)

Managing editor of Netsains.net popular science portal (2007 - now)

Interests:

Popular science writing

Pedagogic

Traveling

References:

.A. A. Parikesit, L. Steiner, P. F Stadler, S.J Prohaska. (2013) Pitfalls of Ascertainment Biases in Genome Annotations-Computing Comparable Protein Domain Distributions in Eukarya. Malaysian Journal of Fundamental and Applied Sciences 10 (2).

A.A Parikesit, Kinanty, U.S.F. Tambunan (2013) Screening of Commercial Cyclic Peptides as Inhibitor Envelope Protein Dengue Virus (DENV) Through Molecular Docking and Molecular Dynamics. Pakistan Journal of Biological Science.

A.A. Parikesit, P. F. Stadler, S.J. Prohaska (2011) Evolution and Quantitative Comparison of Genome-Wide Protein Domain Distributions, 912-924. MDPI Genes 2 (4).

A A Parikesit, P.F. Stadler, S. J. Prohaska (2011) Evolution of domain co-occurrences: some striking results. Extended Abstract of German Conference on Bioinformatics.

A A Parikesit, P.F. Stadler, S.J. Prohaska (2010) Quantitative comparison of genomic-wide protein domain distributions, 93-102. In German Conference on Bioinformatics., P-173.

Other:

 

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