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J.W. Bizzaro J.W. Bizzaro [Send a message]
Member since: June 27, 1998
Jeff is the founder and president of Bioinformatics.Org. His interests include structural and evolutionary bioinformatics, data visualization and user interfaces, plus advocating open access in science. He has an M.Sc. in Chemistry (biochemistry concentration) from Boston College and a B.Sc. in Chemistry from the University of Massachusetts Lowell.
Groups (4)
BioBrew: Package repository
Career Center
News & Commentary
Site Editors
News items (672)
Career Center
Opportunity: Postdoctoral Research Fellow (#47599) @ Carolinas HealthCare System -- Charlotte, NC (US)
Submitted by J.W. Bizzaro; posted on Thursday, March 26, 2015
Bioinformatics Career Survey 2008
Submitted by J.W. Bizzaro; posted on Monday, July 07, 2008
Opportunity: Biomedical Informatics Project Specialist @ Dana-Farber Cancer Inst.--Boston, MA (US)
Submitted by J.W. Bizzaro; posted on Wednesday, June 18, 2008
Opportunity: Senior/Principal BIOSTATISTICIAN--Cambridge, MA (US)
Submitted by J.W. Bizzaro; posted on Friday, January 11, 2008
CNNMoney.com: [US] Job hunting online gets trickier
Submitted by J.W. Bizzaro; posted on Thursday, February 09, 2006
News & Commentary
Etc.: Voting commences for the 2016 Benjamin Franklin Award
Submitted by J.W. Bizzaro; posted on Wednesday, February 10, 2016
Research: LiveScience: Decapitated gladiators reveal Roman Empire's genetic influence
Submitted by J.W. Bizzaro; posted on Friday, January 29, 2016
At Work: Scientists open the `black box' of schizophrenia with dramatic genetic discovery
Submitted by J.W. Bizzaro; posted on Wednesday, January 27, 2016
Research: National Geographic: Last-ditch resistance: more countries, more dire results
Submitted by J.W. Bizzaro; posted on Monday, January 11, 2016
Research: LA Times: Your Neanderthal DNA may help you fight disease, and give you allergies
Submitted by J.W. Bizzaro; posted on Saturday, January 09, 2016
Research: Telegraph: Intelligence genes discovered by scientists
Submitted by J.W. Bizzaro; posted on Monday, December 21, 2015
Software: MMOS: Massively Multiplayer Online Science
Submitted by J.W. Bizzaro; posted on Monday, November 02, 2015
At Work: Clear Food: The Hot Dog Report
Submitted by J.W. Bizzaro; posted on Monday, October 26, 2015
Research: Cell: Reconstruction and simulation of neocortical microcircuitry
Submitted by J.W. Bizzaro; posted on Friday, October 09, 2015
Etc.: DNA sculptures to be auctioned to benefit the Francis Crick Institute
Submitted by J.W. Bizzaro; posted on Friday, September 25, 2015
Only the 10 most recent are shown. [Show all]
Site Editors
Systems down today for software upgrades
Submitted by J.W. Bizzaro; posted on Friday, January 04, 2002
FTP temporarily down due to system upgrade
Submitted by J.W. Bizzaro; posted on Friday, November 09, 2001
File release function being worked on -- temporarily off line
Submitted by J.W. Bizzaro; posted on Saturday, October 13, 2001
Connection Problems NOT QUITE Fixed
Submitted by J.W. Bizzaro; posted on Thursday, October 04, 2001
Connection Problems Fixed
Submitted by J.W. Bizzaro; posted on Monday, October 01, 2001
Full SSH Compatibility Achieved
Submitted by J.W. Bizzaro; posted on Tuesday, March 13, 2001
SSH Available, but Only with SSH2 Protocol
Submitted by J.W. Bizzaro; posted on Sunday, March 11, 2001
SSH Unavailable During Upgrade
Submitted by J.W. Bizzaro; posted on Friday, March 09, 2001
The Web Server is Back
Submitted by J.W. Bizzaro; posted on Wednesday, March 07, 2001
Anonymous CVS is Fixed!
Submitted by J.W. Bizzaro; posted on Saturday, January 06, 2001
Only the 10 most recent are shown. [Show all]
Forum messages (26)
News & Commentary
Re: Franklin Award to Warren DeLano (posthumously)
Submitted by J.W. Bizzaro; posted on Thursday, February 04, 2010
Re: too expensive :(
Submitted by J.W. Bizzaro; posted on Wednesday, December 20, 2006
Registration for R only
Submitted by J.W. Bizzaro; posted on Wednesday, December 06, 2006
Amazing, & just the beginning...
Submitted by J.W. Bizzaro; posted on Friday, November 24, 2006
Re: Too Bad
Submitted by J.W. Bizzaro; posted on Monday, March 20, 2006
Re: Biology Direct aims to succeed
Submitted by J.W. Bizzaro; posted on Saturday, October 08, 2005
Re: No Surprise
Submitted by J.W. Bizzaro; posted on Friday, July 01, 2005
Re: conference registration?
Submitted by J.W. Bizzaro; posted on Saturday, March 26, 2005
Re: excel with biologists
Submitted by J.W. Bizzaro; posted on Friday, December 10, 2004
EMBOSS funding
Submitted by J.W. Bizzaro; posted on Tuesday, May 18, 2004
Only the 10 most recent are shown. [Show all]
Curriculum vitae

Current address:

Bioinformatics Org., Inc.
17 Pope Street
Hudson, MA
United States

Education:

M.Sc. in Chemistry/Biochemistry
Boston College
1996 - 1999
B.Sc. in Chemistry
University of Massachusetts Lowell
1993 - 1996

Experience:

Skills:

Collaborative software development

Comparative genomics

Workflow/pipeline computing

Linux/Unix development and administration

Activities:

Interests:

Open-access in biology and bioethics

Molecular evolution

Comparative genomics

References:

Blake, R.D., Bizzaro, J.W., Blake, J.D., Day, G.R., Delcourt, S.G., Knowles, J., Marx, K.A. and SantaLucia, J., Jr. 1999. Statistical Mechanical Simulation of Polymeric DNA Melting with MELTSIM. Bioinformatics 15(5):370-375.

Bizzaro, J.W. and Marx, K.A. 2003. Poly: a quantitative analysis tool for simple sequence repeat (SSR) tracts in DNA. BMC Bioinformatics 2003 Jun 5, 4(1):22.

Zhou, Y., Bizzaro, J.W. and Marx, K.A. 2004. Homopolymer tract length dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA GC-percent composition. BMC Genomics 5(1):95.

Other:

 

Acknowledgments

We wish to thank the following for their support:

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