[BiO BB] Threader, anyone?
idoerg at cc.huji.ac.il
Wed Jul 4 09:36:51 EDT 2001
Can anybody recommend me a good threading program? By "threading" I mean a
program which accepts a protein sequence, and produces a fold prediction
based on energy minimization by alignment to known folds. More
specifically I'm looking for:
1) A standalone program, preferably on a Linux machine.
2) A program which can produce meaningful results for pairwise threading,
that is, compare several given query sequences against a single fold. But
a library-based threader (such as GenThreader) is also good.
unfortunately the latter is temporarily unavailable for download, AFAIK.
3) Hopefully well documented, easy to use, etc. etc.
Iddo Friedberg | Tel: +972-2-6758647
Dept. of Molecular Genetics and Biotechnology | Fax: +972-2-6757308
The Hebrew University - Hadassah Medical School | email: idoerg at cc.huji.ac.il
POB 12272, Jerusalem 91120 |
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