[BiO BB] Cromatography and RAPD comparison

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Helo

Im doing some resarch on variety identification from cromatograph data
and have encountered the following problem. 

I want to see if there is a way to make a "family tree" - dendrogram of
certain varietis of a plant from data obtained by gas chromatography,
that could be used to compare the cromatography dendrogram with the
alredy finished RAPD (DNA) dendrogram.

Im trying to find some software that can help me. I understand to look
for it in the filed of machine learning and data mining, because the
cromatographs have about 180 peeks and i dont want to leave any out.


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