[BiO BB] How to get the gene sequence efficiently
hz5 at njit.edu
hz5 at njit.edu
Sat Sep 7 18:33:48 EDT 2002
Hi Chunlei,
these info are specified in the ASN.1 file for the contig at NCBI. you can very
easily write a script to extract these infomation out. I am doing it.
========================
Haibo
http://afs13.njit.edu/~hz5
hz5 at njit.edu
========================
Quoting Chunlei Wu <newgene at bigfoot.com>:
> Hi,
> Thank you for your valuable suggestions. To make the things
>
> easier. I am wondering if there is a table available with those info:
>
> Contig Gene Position
> NT_XXXXX gene1 X-XXXXX
> NT_XXXXX gene2 XXXXX-XXXXX
> .......
>
> Thanks again.
>
>
> Chunlei
>
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Haibo Zhang
Computational Biology, NJIT & Rutgers University
http://afs13.njit.edu/~hz5
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