[BiO BB] How to get the gene sequence efficiently

hz5 at njit.edu hz5 at njit.edu
Sat Sep 7 18:33:48 EDT 2002


Hi Chunlei,
these info are specified in the ASN.1 file for the contig at NCBI. you can very 
easily write a script to extract these infomation out. I am doing it.
========================
Haibo
http://afs13.njit.edu/~hz5
hz5 at njit.edu
========================

Quoting Chunlei Wu <newgene at bigfoot.com>:

> Hi,
>            Thank you for your valuable suggestions. To make the things
> 
> easier.  I am wondering if there is a table available with those info:
> 
> Contig                    Gene                Position
> NT_XXXXX            gene1             X-XXXXX
> NT_XXXXX            gene2             XXXXX-XXXXX
> .......
> 
> Thanks again.
> 
> 
> Chunlei
> 
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> 



Haibo Zhang
Computational Biology, NJIT & Rutgers University
http://afs13.njit.edu/~hz5




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