[BiO BB] Tools to search AG rich fragments around a long DNA sequence?
jrg at world.std.com
Wed Apr 9 12:59:18 EDT 2003
On Wednesday, April 9, 2003, at 12:04 PM, Li, Hewei wrote:
> I am looking for DNA sequence analysis tools which could locate DNA
> fragments around 20 bases in length with rich purines (i.e., A or G)
> over a
> given DNA sequence. Could someone help me out? Many thanks!
can you define purine richness in terms of a percentage? it seems
writing such a tool in a perl script would be very easy and very quick.
do you have access to a unix/linux machine or are you looking more for
an app with a GUI?
More information about the BBB