[BiO BB] Graph Formats

erick antezana erick at amaze.ulb.ac.be
Wed Aug 4 05:01:06 EDT 2004


Hello,
   does anyone know or use some XML-based exchange graph format for 
representing pathways/regulatory networks/etc ?

GraphML (http://graphml.graphdrawing.org/index.html) seems to be a nice 
format as well as GINML 
(http://www.esil.univ-mrs.fr/~chaouiya/Recherche/GINML/index.html)... 
could someone advice me which one to use? Pros ans Cons?

thanks in advance,
erick




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