[BiO BB] (no subject)

[Fiona Roche]

> I'm looking for software that will indicate if I have a secretion protein or
> not.
Check out PSORTB, a tool which predicts the subcellular localization of
a protein from its sequence. The current version handles protein
sequences from Gram-negative bacteria only however, a newer version for
Gram positives is in the pipeline. 

http://www.psort.org/psortb/index.html

Fiona

> I'm also looking for some software that will find cleavage site within my
> seq.
> Any suggestions ??
> Regards
> James
> James Tucker
> Brucella Research Group
> Department of Bacterial Diseases
> VLA Weybridge
> Woodham Lane
> New Haw
> Addlestone
> Surrey
> KT15 3NB
> 
> Tel: ++44(0)1932 357227 / 359595
> Fax: ++44(0)1932 357873
> 
> mailto:j.d.tucker at vla.defra.gsi.gov.uk
> 
> 
> 
> 
> 
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> 
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-- 
Fiona Roche, PhD
MBB, Brinkman Lab,
Simon Fraser University,
Burnaby, British Columbia, Canada
Phone: (001)-604-291-4206
Email: fmr at sfu.ca