[BiO BB] installing blast

[Joe Landman]

Hi Angel:

   You need to make sure that blastall is in your path.  Try this:

	which blastall

If it is working properly, you should see something like this:

	hammer:~ # which blastall
	/usr/bin/blastall

You may need to edit your .cshrc or .bashrc to reflect the path to 
BLAST.  If you prefer to use an RPM for installation, feel free to grab 
them from http://downloads.scalableinformatics.com/downloads/ncbi/ .

Joe

ANGEL CARLOS ROMAN GARCI wrote:
> I've got a problem with the Standalone BLAST;
> 
> after I unzip and untar it, I put the .ncbirc file with
> [NCBI]
> Data="mypath/data"
> 
> and I unzip a db (Fasta preformatted);
> 
> right now, it should work, but no command is recognized in the console.
> neither blastall, nor the others (but these commands exists in the
> directory).
> 
> could you help me?
> Thanks
> 
> 
> 
> _______________________________________________
> BiO_Bulletin_Board maillist  -  BiO_Bulletin_Board at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/bio_bulletin_board

-- 
Joe Landman
Scalable Informatics LLC
email: landman at scalableinformatics.com
web  : http://scalableinformatics.com
phone: +1 734 612 4615