[BiO BB] Extracting blocks of seq alignment

Dr. Christoph Gille christoph.gille at charite.de
Tue Nov 30 16:51:39 EST 2004

Hi all,

STRAP would work as well.

1. import of the Multiple sequ file (MSF or clustalw file).
2. Export and setting the alignment begin and end index.
Both is found in the file menu.

Warning: requires about 20 min for the intro tutorial.

Good look

> Hi All,
> I have been looking for an alignment editor/ script that will extract
> blocks of multiple sequence alignment (when given the residue numbers etc.)
> from a longer multiple sequence alignment. Any suggetions will be helpful.
> Thanks,
> - Manisha Goel
> _______________________________________________
> BiO_Bulletin_Board maillist  -  BiO_Bulletin_Board at bioinformatics.org
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