[BiO BB] Orthologous upstream sequence analysis
joel.dudley at asu.edu
Wed Oct 19 22:53:54 EDT 2005
What type of analysis would you like to do? Do you want to calculate
rates of evolution? Construct a phylogeny?
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On Oct 9, 2005, at 1:44 PM, Samantha Fox wrote:
> I am looking for various options to analyze a set of 300bp long
> orthologous sequences from a group of phylogenetically related
> species. Its like 5-8 promoter dna sequences per gene for around
> 2000 genes.
> What can be the best ways to do this analysis, I looked at some
> phylogenetic tools, but most have limitations like web-based, just
> 2 sequences, etc.
> All your suggestions... and anyone experienced with similar
> stuff. ... I welcome it all...
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