[BiO BB] Reading DNA ambiguity codes with WuBlast blastn 2.0

Charles Danko dankoc at gmail.com
Tue Dec 12 13:37:52 EST 2006


Does anyone know of a method to compare DNA template sequences that contain
IUPAC ambiguity codes (i.e. W=A/T) to a database using WuBlast blastn 2.0?
I've been through the docs, and havent found anything on ambiguity code
support besides N (any base).

Thanks very much!

More information about the BBB mailing list