[BiO BB] Looking for heat map Software
hararid at bgu.ac.il
Sun Jul 23 02:31:04 EDT 2006
Thanks for responding.
I am new to writing R scripts and am not sure if I can overcome a few
Do you know the answer to these questions?
- Do you know of a way to generate a user-defined upper and lower range
in which to define the color-code of the heatmap?
- R also offers a number of pseudocolor options, but in my output files,
I always see the same pink-green-white output.
Maximilian Haeussler wrote:
> what do you find awful about the R heatmap?
> On 16/07/06, Daniel Harari <hararid at bgu.ac.il> wrote:
>> I am looking for software that will produce good quality heat maps out
>> of tabular data.
>> The program does not necessarily have to be freeware, although hopefully
>> it will not be too expensive to purchase (such as is the case for
>> I have tried using "R", but the output graphics seem to be pretty awful.
>> Any suggestions would be much appreciated.
>> Bioinformatics.Org general forum -
>> BiO_Bulletin_Board at bioinformatics.org
> Bioinformatics.Org general forum -
> BiO_Bulletin_Board at bioinformatics.org
Daniel Harari, Ph.D.
National Institute for Biotechnology in the Negev
Building 39, room -113
Ben-Gurion University of the Negev
Beer-Sheva 84105, Israel
Email: hararid at bgu.ac.il
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