[BiO BB] A series of Pairwise alignments

hamid hamid at ibb.ut.ac.ir
Sat Jun 3 06:25:47 EDT 2006

  Hi buddy,
 Does anybody know how can I perform a series of pairwise alignments among 
all members of a set of proteins (almost 150 proteins) those I have their 
FastA sequences and sort mostly matched couples? I do not want to use 
ClustalW multiple alignment.

 Hamid Nikbakht,
 M.Sc of Cell and Molecular Biology,
 Laboratory of Biophysics and Molecular Biology,
 Bioinformatics Center,
 Institute of Biochemistry and Biophysics(IBB),
 University of Tehran,
 Tel: +98-21-6111-3322
 Fax: +98-21-6640-4680
 Alt. E-mail: nikbakht at ibb.ut.ac.ir

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