[BiO BB] note or error in formatdb ?

Joe Landman landman at scalableinformatics.com
Mon Jun 5 20:28:00 EDT 2006


Carlos Viana wrote:
> Hi members,
> 
> Today, I performed formatdb tool with the following line command:
> 
>  >>>> formatdb -i file.fasta -o T -p T
> 
> But I had this message in formatdb.log:
> 
> "NOTE: ncbiapi [000.000] SeqIdParse Failure at >gi|200001"

Is this a duplicate?  Try using the -V option with 2.2.14

> 
> So, anyone know what kind of message is this?
> Is this an error or just a warning?
> I performed with versions 2.2.12 and 2.2.14.
> 
> Thanks,
> cviana
> 
> 
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Joseph Landman, Ph.D
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