[BiO BB] A tool for gene identification..

[Maximilian Haeussler]

You could also try to SSH  (fast blast) against all of genbank,
everything in any genome or other sequences.

-max

On 01/05/06, Mhmoud Elhefnawi <mahef111 at link.net> wrote:
>
> Dear colleagues,
> Our lab isolated a 196 bp fragment from humans  from more than one cell type
> ( part of a gene that is an oncogene for cancer). Conducting BLAST searches
> of all types resulted in no homology to any published human gene.  Is there
> some tool that can identify the human genome to:
> 1) locate on which chromosome is this sequence?
> 2) enable us to get the rest of the sequence of that gene?
> 3)  predict this gene based on the sequence submitted?
>
> Your help is very highhly appreciated.
> Thanks,
>
> Mahmoud
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