[BiO BB] A tool for gene identification..

[Natarajan Ganesan]

Did u try "InstaSeq" - http://bioinformatics.georgetown.edu/InstaSeq.htm ?

 

Natarajan Ganesan, PhD

Email: ng6 at georgetown.edu 

 

  _____  

From:
bio_bulletin_board-bounces+natarajanganesan=gmail.com at bioinformatics.org
[mailto:bio_bulletin_board-bounces+natarajanganesan=gmail.com at bioinformatics
.org] On Behalf Of Mhmoud Elhefnawi
Sent: Monday, May 01, 2006 5:38 PM
To: bio_bulletin_board at bioinformatics.org
Subject: [BiO BB] A tool for gene identification..

 

Dear colleagues,

Our lab isolated a 196 bp fragment from humans  from more than one cell type
( part of a gene that is an oncogene for cancer). Conducting BLAST searches
of all types resulted in no homology to any published human gene.  Is there
some tool that can identify the human genome to:

1) locate on which chromosome is this sequence?

2) enable us to get the rest of the sequence of that gene?

3)  predict this gene based on the sequence submitted?

 

Your help is very highhly appreciated.

Thanks,

Mahmoud

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