[BiO BB] E.coli K12 W3110 and MG1655 gene id conversion
Roy Chaudhuri
roy at colibase.bham.ac.uk
Tue May 9 07:56:11 EDT 2006
Hi Sarah,
> I need to convert gene ID at KEGG of E.coli K12 W3110 (like "JW0001") to the
> corresponding MG1655 geneID, ideally to Blattner Number (like "b0001").
> Does anybody know where to download this conversion table or does anybody
> have one?
Our recent reannotation of the E.coli K-12 genome includes a table with
this (and lots of other) information in the supplementary data. See:
http://nar.oxfordjournals.org/cgi/content/full/34/1/1
http://nar.oxfordjournals.org/content/vol34/issue1/images/data/1/DC1/Supplementary_Table_1_Annotation_E._coli_Genes.txt
Roy.
--
Dr. Roy Chaudhuri
Bioinformatics Research Fellow
Division of Immunity and Infection
University of Birmingham, U.K.
http://xbase.bham.ac.uk
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