[BiO BB] Percentage sequence identity calculation program
Martin Jambon
martin_jambon at emailuser.net
Tue May 9 14:00:33 EDT 2006
Hi,
A summary of the issues concerning percentage identity can be read (and
extended) at wikiomics.org:
http://wikiomics.org/wiki/Percentage_identity
Martin
On Tue, 9 May 2006, Lipika Ray wrote:
> Hello,
>
> I have a set of fragments of sequences which are of different length. I
> want to calculate percentage sequence identity of those sequences. Which
> program will be the fittest to do this type of calculation? I have seen
> that lot of databases are reporting about percentage sequence identity of
> the sequences used, but by which program they calculate it, I have no idea
> about that. Please help me if anyone have any clue.
> Thanks in advance,
>
> Lipika
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--
Martin Jambon, PhD
http://martin.jambon.free.fr
Edit http://wikiomics.org, bioinformatics wiki
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