[BiO BB] PISE interface for blast

Ethan Strauss ethan.strauss at promega.com
Fri Oct 20 10:44:47 EDT 2006

    I am working with a PISE interface for BLAST right now. I don't
pretend to be know what I am doing, but I am doing something :-)
    Anyway, I could send you the interface I have and you could at least
use it as a starting point. Alternately, you could take a look at
http://www.pasteur.fr/recherche/unites/sis/Pise/XML/. There is an
example there...


bio_bulletin_board-bounces+ethan.strauss=promega.com at bioinformatics.org
[mailto:bio_bulletin_board-bounces+ethan.strauss=promega.com at bioinformat
ics.org] On Behalf Of Samantha Fox
Sent: Thursday, October 19, 2006 10:40 AM
To: The general forum at Bioinformatics.Org
Subject: [BiO BB] PISE interface for blast

any of you familiar with generating PISE interface for a database that I
wish to blast.
Do we have to write a separate xml for that ? Any help or suggestion
would be welcome.


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