[BiO BB] EST alignment to genome

Ann Loraine aloraine at gmail.com
Fri Feb 2 10:55:25 EST 2007


Hello,

You can get EST alignments in machine-readable bulk formats from the
UCSC Genome Informatics site. Take a look at the the "Tables" link and
the "Table Browser" tool.

-Ann



On 2/2/07, Javier Forment Millet <jforment at ibmcp.upv.es> wrote:
> Hi,... we need a detailed mapping of every public human EST to the human genome,
> i.e. which genome position corresponds to each EST nucleotide. I've checked
> Ensembl an UCSC, but I couldn't find the detailed information there.
>
> Any idea?
>
> Thank you in advance and best wishes,
>
> Javier.
>
> --
> Javier Forment Millet
> Instituto de Biologia Molecular y Celular de Plantas (IBMCP)
> UPV-CSIC
> Avenida de los Naranjos, s/n
> 46022 Valencia (SPAIN)
> jforment at ibmcp.upv.es
> Tlf.:+34-96-3877885
> FAX: +34-96-3877859
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