[BiO BB] SNP analysis program
forward at hongyu.org
Wed Feb 14 16:22:27 EST 2007
I am looking for a SNP analysis program, which is good at
Allow me to edit
We have looked at Polyphred and Sequencher. Polyphred works well in
Linux/Unix, so it can be wrapped in a shell script to run in batch mode
processing bulk data. It is also in good compatibility with Phred/Phrap
and consed. Sequencher has nice GUI and runs on Windows, which is good
for scientist to do annotation interactively, but I am not sure whether
it can be run in batch mode.
If you have any good suggestions, please let me know. Thanks!
Hongyu Zhang, Ph.D.
Ceres Inc., Thousand Oaks, CA
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