[BiO BB] Are there servers or programs

Shameer Khadar skhadar at gmail.com
Fri Jan 5 00:36:52 EST 2007

There are plenty of programs/webservers available for structure alignment.
First of all try this Wiki :
http://en.wikipedia.org/wiki/Structural_alignment_software . It is a good
starting point.

Your second requirement is not clear to me
May be PASS2 Database @ NCBS : http://caps.ncbs.res.in/pass2 or
DALI at EBIwill be useful to you.


On 1/4/07, soorya kiran <kiran.soorya at gmail.com> wrote:
> Are there servers or programs (which are downloadable) which can used
> for structure alignment of proteins and where we can get the atomic
> co-ordinates of the protein after alignment?
> Srijith,
> SooryaKiran Bioinformatics (P) LTD,
> Industry Incubation Centre,
> University of Kerala,
> Karyavattom Campus,
> Thiruvananthapuram,
> Keralam,
> India. 695 581
> Ph : +91 (471) 2414593
> www.sooryakiran.com
> Email : kiran.soorya at gmail.com
> Confidentiality Statement :- The contents of this e-mail, including its
> attachment, are intended for the exclusive use of the recipient and may
> contain confidential or privileged information.  If you are not the
> intended
> recipient, you are strictly prohibited from reading, using, disclosing,
> copying, or distributing this e-mail or any of its contents.  If you
> received this e-mail in error, please notify the sender by reply e-mail
> immediately and permanently delete this e-mail and its attachments, along
> with any copies thereof.  Thank you.
> --
> _______________________________________________
> General Forum at Bioinformatics.Org -
> BiO_Bulletin_Board at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/bio_bulletin_board

More information about the BBB mailing list