[BiO BB] sequence analysis

Martin Gollery marty.gollery at gmail.com
Tue Oct 23 19:27:26 EDT 2007

For an exact match you can simply use grep, or open the target in an
editor such as textpad and use the search function.


On 10/23/07, nikhil gadewal <ngadewal at yahoo.com> wrote:
> Hello all
>   I am interested to find tetramer peptide matching 100% to the carboxyl terminal of the protein sequences from human.
>   Is there any specific tool available to do so.
>   Can BLAST or FASTA handle it by changing the parameters.
>   Thankyou in advance.
>   Nikhil
> NIKHIL S. GADEWAL ACTREC, Tata Memorial Centre, Kharghar, Navi Mumbai, India  Great minds discuss ideas; Average minds discuss events; Small minds discuss people.
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Martin Gollery
Senior Bioinformatics Scientist
TimeLogic- a Division of Active Motif
880 Northwood Blvd. Suite 7
Incline Village, NV 89451

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