[BiO BB] Aligning sequence from pdb to an established MSA

[Stefan Rensing]

> clustalw and Tcoffee are the two programs I knwow that
> can align a sequence to an alignment.
> But they just take the sequence and disregard 3D information.

ClustalW can make use of the structural information as present in a
swissprot format entry.


-- 
Dr. Stefan Rensing
Group Leader Computational Biology, Head Core Facility Data Management
Plant Biotechnology, Faculty of Biology, University of Freiburg
Schaenzlestr. 1, D-79104 Freiburg, Fon: +49 761 203-6974, Fax: -6945
http://www.plant-biotech.net/  http://www.cosmoss.org/
stefan.rensing at biologie.uni-freiburg.de

"You're analog players in a digital world."