[BiO BB] Newbie question.

[darx]

Any ideas for an insilico methodology?

On 06/01/2008, Donnie Darko <rabidstrikes at googlemail.com> wrote:
>
> Hi folks,
>
> Suppose I have a novel gene whose product is a DNA binding protein, how
> would I go about locating potential binding sites where this protein could
> bind? I'm only interested in finding sites for this specific protein and
> not
> a general scan of tfbs.
>
> I've extracted upstream sequences of genes that I'm interested in but I
> can't think of a way forward.
>
> Cheers and belated happy new year :-P
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