[BiO BB] Association of a protein with a disease

[Brent Pedersen]

You might have a look at connectivity map:
http://www.broadinstitute.org/cmap/

On Tue, Aug 21, 2012 at 1:03 AM, Pankaj Khurana <pkhurana08 at gmail.com> wrote:
> On Thu, Aug 16, 2012 at 2:45 PM, Pankaj Khurana <pkhurana08 at gmail.com>wrote:
>
>> Hi All,
>>
>> I have a list of ~3000 proteins which are up/down-regulated in a
>> particular disease condition.
>> I would like to ask the forum,
>> 1) what in-silico analysis can be done to identify a biomarker out of them
>> 2) Can a prediction model be developed based on them ? So for example to
>> check whether a new protein is associated with the disease, just use these
>> 3000 and predict likelihood of association with the disease for the  new
>> protein.
>>
>>
>> Thanking all in advance
>>
>> Best reagrds,
>> Pankaj
>> --
>>
>>
>
>
> --
> Dr. (Mrs.) Pankaj Khurana
> Scientist 'C'
> Defence Institute of Physiology and Allied Sciences,
> Defence R&D Organization,
> Lucknow Road,
> Timarpur,
> New Delhi.
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