[BiO BB] extracting mutation data from MSA

Dr. Achuthsankar S. Nair sankar.achuth at gmail.com
Thu Jul 11 01:43:43 EDT 2013


>From file such as the one attached having an alignment in standard format
(MSA), is there any tool that can fish out the nucleotide changes and their
positions in some format like this:
1.G-A( 760),
2.A-G (1000)
3.C-T (9385)



-- 
*Dr Achuthsankar S Nair*  *ഡോ. അച്യുത് ശങ്കര്‍ എസ് നായര്‍
*Head, Dept of Computational Biology and Bioinformatics
University of Kerala, Trivandrum 695581, Kerala, INDIA
Tel (O) 0471-2308759 (R) 0471-3192346/ 0471-2542220

Personal Web Page    www.achu.keralauniversity.edu
Dept Web page           dcb.keralauniversity.ac.in

*GREEN TIP #2:* *Adopt a green charter for academic seminars and class room
practices*
-------------- next part --------------
CLUSTAL 2.1 multiple sequence alignment


R1              ACGTAGCCTACCAGTTTCTTACTGCTCTACTCTGCTTAGCAAGAGACTTGAGAACCCATC 60
R2              ACGTAGCCTACCAGTTTCTTACTGCTCTACTCTGCTTAGCAAGAGACTTGAGAACCCATC 60
                ************************************************************

R1              ATGGATCCCGTGTACGTGGACATAGACGCCGACAGCGCCTTTTTGAAGGCCCTGCAGCGT 120
R2              ATGGATCCCGTGTACGTGGACATAGACGCCGACAGCGCCTTTTTGAAGGCCCTGCAGCGT 120
                ************************************************************

R1              GCGTACCCCATGTTTGAGGTGGAACCAAGGCAGGTCACACCGAATGACCATGCCAATGCT 180
R2              GCGTACCCCATGTTTGAGGTGGAACCAAGGCAGGTCACACCGAATGACCATGCCAATGCT 180
                ************************************************************

R1              AGAGCATTCTCGCATCTAGCTATAAAACTAATAGAGCAGGAAATTGATCCCGACTCAACC 240
R2              AGAGCATTCTCGCATCTAGCTATAAAACTAATAGAGCAGGAAATTGATCCCGACTCAACC 240
                ************************************************************

R1              ATCCTGGACATAGGCAGCGCGCCAGCAAGGAGGATGATGTCGGATAGGAAGTATCACTGC 300
R2              ATCCTGGACATAGGCAGCGCGCCAGCAAGGAGGATGATGTCGGATAGGAAGTATCACTGC 300
                ************************************************************

R1              GTTTGCCCAATGCGCAGCGCAGAAGACCCTGAGAGACTCGCCAACTACGCGAGAAAACTA 360
R2              GTTTGCCCAATGCGCAGCGCAGAAGACCCTGAGAGACTCGCCAACTACGCGAGAAAACTA 360
                ************************************************************

R1              GCATCTGCCGCAGGAAAAGTCTTGGACAGAAACATCTCCGGAAAAATCGGAGATCTACAA 420
R2              GCATCTGCCGCAGGAAAAGTCTTGGACAGAAACATCTCCGGAAAAATCGGAGATCTACAA 420
                ************************************************************

R1              GCAGTAATGGCTGTACCAGACGCAGAAACGCCCACATTCTGCTTGCACACTGACGTCTCA 480
R2              GCAGTAATGGCTGTACCAGACGCAGAAACGCCCACATTCTGCTTGCACACTGACGTCTCA 480
                ************************************************************

R1              TGTAGACAAAGGGCGGACGTCGCTATATACCAGGACGTCTACGCCGTGCATGCACCAACA 540
R2              TGTAGACAAAGGGCGGACGTCGCTATATACCAGGACGTCTACGCCGTGCATGCACCAACA 540
                ************************************************************

R1              TCGCTATACCACCAGGCGATTAAAGGAGTCCGTGTAGCATACTGGATAGGGTTTGATACA 600
R2              TCGCTATACCACCAGGCGATTAAAGGAGTCCGTGTAGCATACTGGATAGGGTTTGATACA 600
                ************************************************************

R1              ACCCCGTTCATGTATAATGCCATGGCAGGTGCATACCCCTCGTACTCGACAAACTGGGCA 660
R2              ACCCCGTTCATGTATAATGCCATGGCAGGTGCATACCCCTCGTACTCGACAAACTGGGCA 660
                ************************************************************

R1              GATGAGCAGGTGCTGAAGGCAAAGAACATAGGATTATGTTCAACAGACCTGACGGAAGGT 720
R2              GATGAGCAGGTGCTGAAGGCAAAGAACATAGGATTATGTTCAACAGACCTGACGGAAGGT 720
                ************************************************************

R1              AGACGAGGTAAATTGTCTATCATGAGAGGAAAAAAGATGGAGCCATGTGACCGCGTACTG 780
R2              AGACGAGGTAAATTGTCTATCATGAGAGGAAAAAAGATGAAGCCATGTGACCGCGTACTG 780
                ***************************************.********************

R1              TTCTCAGTCGGGTCAACGCTTTACCCGGAGAGCCGTAAGCTTCTTAAGAGTTGGCACTTA 840
R2              TTCTCAGTCGGGTCAACGCTTTACCCGGAGAGCCGTAAGCTTCTTGAGAGTTGGCACTTA 840
                *********************************************.**************

R1              CCTTCAGTGTTCCATCTAAAAGGGAAGCTCAGCTTCACGTGCCGCTGTGATACAGTGGTT 900
R2              CCTTCAGTGTTCCATCTAAAAGGGAAGCTCAGCTTCACGTGCCGCTGTGATACAGTGGTT 900
                ************************************************************

R1              TCGTGTGAAGGCTATGTCGTTAAGAGAATAACGATTAGCCCGGGCCTCTACGGTAAAACC 960
R2              TCGTGTGAAGGCTATGTCGTTAAGAGAATAACGATTAGCCCGGGCCTCTACGGTAAAACC 960
                ************************************************************

R1              ACAGGGTACGCAGTAACCCACCATGCAGACGGATTCCTAATGTGCAAAACAACCGATACG 1020
R2              ACAGGGTACGCAGTAACCCACCATGCAGACGGATTCCTAGTGTGCAAAACAACCGATACG 1020
                ***************************************.********************

R1              GTAGATGGCGAGAGAGTGTCATTTTCGGTATGCACGTACGTACCCGCAACCATTTGTGAT 1080
R2              GTAGATGGCGAGAGAGTGTCATTTTCGGTATGCACGTACGTACCCGCAACCATTTGTGAT 1080
                ************************************************************

R1              CAAATGACAGGTATTCTTGCCACGGAGGTTACACCGGAGGATGCACAGAAGCTGCTGGTG 1140
R2              CAAATGACAGGTATTCTTGCCACGGAGGTTACACCGGAGGATGCACAGAAGCTGCTGGTG 1140
                ************************************************************

R1              GGACTGAACCAGAGGATAGTGGTCAATGGCAGAACGCAGAGGAACACGAACACAATGAAG 1200
R2              GGACTGAACCAGAGGATAGTGGTCAATGGCAGAACGCAGAGGAACACGAACACAATGAAG 1200
                ************************************************************

R1              AATTACTTGCTTCCTGTGGTTGCCCAAGCCTTCAGTAAGTGGGCAAAGGAATGCCGGAAA 1260
R2              AATTACTTGCTTCCTGTGGTTGCCCAAGCCTTCAGTAAGTGGGCAAAGGAATGCCGGAAA 1260
                ************************************************************

R1              GATATGGAAGATGAAAAACTTTTGGGCATCAGAGAAAGGACACTGACATGCTGCTGCCTT 1320
R2              GATATGGAAGATGAAAAACTTTTGGGCATCAGAGAAAGGACACTGACATGCTGCTGCCTT 1320
                ************************************************************

R1              TGGGCGTTCAAGAAGCAGAAGACACACACGGTCTACAAGAGGCCTGACACTCAGTCAATT 1380
R2              TGGGCGTTCAAGAAGCAGAAGACACACACGGTCTACAAGAGGCCTGACACTCAGTCAATT 1380
                ************************************************************

R1              CAGAAAGTCCCAGCCGAATTTGACAGCTTTGTGGTACCAAGTCTGTGGTCATCTGGACTG 1440
R2              CAGAAAGTCCCAGCCGAATTTGACAGCTTTGTGGTACCAAGTCTGTGGTCATCTGGACTG 1440
                ************************************************************

R1              TCGATCCCGCTACGGACCAGAATCAAGTGGCTGCTAAGCAAAGTGCCAAAGACTGATTTG 1500
R2              TCGATCCCGCTACGGACCAGAATCAAGTGGCTGCTAAGCAAAGTGCCAAAGACTGATTTG 1500
                ************************************************************

R1              ATCCCTTACAGCGGTGACGCCAAAGAAGCCCGCGATGCTGAAAAAGAAGCAGAAGAAGAA 1560
R2              ATCCCTTACAGCGGTGACGCCAAAGAAGCCCGCGATGCTGAAAAAGAAGCAGAAGAAGAA 1560
                ************************************************************

R1              CGAGAAGCGGAGCTAACTCGCGAGGCACTACCACCACTACAGGCGGCACAGGATGACGTC 1620
R2              CGAGAAGCGGAGCTAACTCGCGAGGCACTACCACCACTACAGGCGGCACAGGATGACGTC 1620
                ************************************************************

R1              CAGGTCGAAATTGACGTGGAACAGCTCGAAGACAGAGCTGGGGCAGGAATAATTGAAACT 1680
R2              CAGGTCGAAATTGACGTGGAACAGCTCGAAGACAGAGCTGGGGCAGGAATAATTGAAACT 1680
                ************************************************************

R1              CCAAGAGGAGCTATCAAAGTCACTGCCCAACCAACAGACCACGTCGTGGGAGAGTACTTG 1740
R2              CCAAGAGGAGCTATCAAAGTCACTGCCCAACCAACAGACCACGTCGTGGGAGAGTACTTG 1740
                ************************************************************

R1              GTACTTTCCCCGCAGACCGTGTTACGAAGCCAGAAGCTCAGCCTGATCCACGCATTGGCG 1800
R2              GTACTTTCCCCGCAGACCGTGTTACGAAGCCAGAAGCTCAGCCTGATCCACGCATTGGCG 1800
                ************************************************************

R1              GAACAAGTGAAGACATGCACACACAGCGGACGAGCAGGAAGGTACGCGGTCGAAGCATAT 1860
R2              GAACAAGTGAAGACATGCACACACAGCGGACGAGCAGGAAGGTACGCGGTCGAAGCATAT 1860
                ************************************************************

R1              GACGGCAGAATCCTTGTGCCCTCAGGCTATGCAATATCACCTGAAGACTTCCAGAGCCTG 1920
R2              GACGGCAGAATCCTTGTGCCCTCAGGCTATGCAATATCACCTGAAGACTTCCAGAGCCTG 1920
                ************************************************************

R1              AGCGAAAGTGCGACGATGGTGTACAACGAAAGGGAGTTCGTAAATAGGAAATTACACCAT 1980
R2              AGCGAAAGTGCGACGATGGTGTACAACGAAAGGGAGTTCGTAAATAGGAAATTACACCAT 1980
                ************************************************************

R1              ATCGCGTTGCACGGACCAGCCCTGAACACTGACGAGGAGTCGTACGAGCTGGTAAGGGCA 2040
R2              ATCGCGTTGCACGGACCAGCCCTGAACACTGACGAGGAGTCGTACGAGCTGGTAAGGGCA 2040
                ************************************************************

R1              GAAAGGACAGAGCATGAGTACGTCTATGATGTGGACCAAAGAAGGTGCTGCAAGAAAGAG 2100
R2              GAAAGGACAGAGCATGAGTACGTCTATGATGTGGACCAAAGAAGGTGCTGCAAGAAAGAG 2100
                ************************************************************

R1              GAGGCAGCCGGGCTGGTACTGGTCGGCGACTTGACCAACCCGCCCTACCATGAGTTCGCA 2160
R2              GAGGCAGCCGGGCTGGTACTGGTCGGCGACTTGACCAACCCGCCCTACCATGAGTTCGCA 2160
                ************************************************************

R1              TATGAAGGGCTGAGAATCCGCCCCGCCTGCCCATACAAGACCGCAGTAATAGGGGTCTTT 2220
R2              TATGAAGGGCTGAGAATCCGCCCCGCCTGCCCATACAAGACCGCAGTAATAGGGGTCTTT 2220
                ************************************************************

R1              GGAGTGCCAGGATCCGGCAAATCAGCAATCATTAAGAACCTAGTTACCAGGCAAGACCTA 2280
R2              GGAGTGCCAGGATCCGGCAAATCAGCAATCATTAAGAACCTAGTTACCAGGCAAGACCTA 2280
                ************************************************************

R1              GTGACCAGTGGAAAGAAAGAAAACTGCCAAGAAATCTCCACCGACGTGATGCGACAGAGG 2340
R2              GTGACCAGTGGAAAGAAAGAAAACTGCCAAGAAATCTCCACCGACGTGATGCGACAGAGG 2340
                ************************************************************

R1              AATCTGGAGATATCTGCACGCACGGTCGACTCACTGCTCTTGAACGGATGCAACAGACCA 2400
R2              AATCTGGAGATATCTGCACGCACGGTCGACTCACTGCTCTTGAACGGATGCAACAGACCA 2400
                ************************************************************

R1              GTCGACGTGTTGTACGTCGACGAAGCGTTTGCGTGCCATTCTGGCACGCTACTTGCTCTG 2460
R2              GTCGACGTGTTGTACGTCGACGAAGCGTTTGCGTGCCATTCTGGCACGCTACTTGCTCTG 2460
                ************************************************************

R1              ATAGCCTTGGTGAGACCGAGGCAGAAAGTCGTGCTATGCGGTGATCCGAAACAGTGCGGC 2520
R2              ATAGCCTTGGTGAGACCGAGGCAGAAAGTCGTGCTATGCGGTGATCCGAAACAGTGCGGC 2520
                ************************************************************

R1              TTCTTCAATATGATGCAGATGAAAGTTAACTACAACCATAACATCTGCACCCAAGTGTAC 2580
R2              TTCTTCAATATGATGCAGATGAAAGTTAACTACAACCATAACATCTGCACCCAAGTGTAC 2580
                ************************************************************

R1              CATAAAAGTATTTCCAGGCGGTGTACACTGCCTGTGACTGCCATTGTGTCCTCGTTGCAT 2640
R2              CATAAAAGTATTTCCAGGCGGTGTACACTGCCTGTGACTGCCATTGTGTCCTCGTTGCAT 2640
                ************************************************************

R1              TACGAAGGCAAAATGCGCACAACAAATGAGTACAACAAGCCAATTGTAGTGGATACTACA 2700
R2              TACGAAGGCAAAATGCGCACAACAAATGAGTACAACAAGCCAATTGTAGTGGATACTACA 2700
                ************************************************************

R1              GGCTCGACAAAACCCGACCCCGGAGACCTTGTGCTAACATGTTTCAGAGGGTGGGTTAAG 2760
R2              GGCTCGACAAAACCCGACCCCGGAGACCTTGTGCTAACATGTTTCAGAGGGTGGGTTAAG 2760
                ************************************************************

R1              CAACTGCAAATTGACTACCGTGGACACGAGGTCATGACAGCAGCTGCATCTCAGGGGCTA 2820
R2              CAACTGCAAATTGACTACCGTGGACACGAGGTCATGACAGCAGCTGCATCTCAGGGGCTA 2820
                ************************************************************

R1              ACCAGAAAAGGGGTCTATGCCGTCAGGCAAAAAGTCAATGAAAACCCCCTTTACGCATCA 2880
R2              ACCAGAAAAGGGGTCTATGCCGTCAGGCAAAAAGTCAATGAAAACCCCCTTTACGCATCA 2880
                ************************************************************

R1              ACATCAGAGCACGTGAACGTGCTACTGACGCGTACGGAAGGCAAACTAGTATGGAAGACA 2940
R2              ACATCAGAGCACGTGAACGTGCTACTGACGCGTACGGAAGGCAAACTAGTATGGAAGACA 2940
                ************************************************************

R1              CTTTCTGGAGACCCATGGATAAAGACACTGCAGAACCCGCCGAAAGGAAATTTTAAAGCA 3000
R2              CTTTCTGGAGACCCATGGATAAAGACACTGCAGAACCCGCCGAAAGGAAATTTTAAAGCA 3000
                ************************************************************

R1              ACAATTAAGGAATGGGAAGTGGAACATGCTTCAATAATGGCGGGTATCTGTAACCACCAA 3060
R2              ACAATTAAGGAATGGGAAGTGGAACATGCTTCAATAATGGCGGGTATCTGTAACCACCAA 3060
                ************************************************************

R1              GTGACCTTTGACACGTTCCAGAATAAAGCCAATGTCTGCTGGGCGAAGAGCTTAGTCCCC 3120
R2              GTGACCTTTGACACGTTCCAGAATAAAGCCAATGTCTGCTGGGCGAAGAGCTTAGTCCCC 3120
                ************************************************************

R1              ATCCTAGAAACAGCAGGAATAAAATTAAACGACAGGCAGTGGTCCCAGATAATCCAGGCT 3180
R2              ATCCTAGAAACAGCAGGAATAAAATTAAACGACAGGCAGTGGTCCCAGATAATCCAGGCT 3180
                ************************************************************

R1              TTTAAAGAAGACAGAGCATACTCACCCGAGGTGGCCCTGAATGAGATATGCACGCGCATG 3240
R2              TTTAAAGAAGACAGAGCATACTCACCCGAGGTGGCCCTGAATGAGATATGCACGCGCATG 3240
                ************************************************************

R1              TACGGGGTAGACCTGGACAGCGGGCTGTTCTCTAAACCACTGGTGTCCGTGCATTATGCG 3300
R2              TACGGGGTAGACCTGGACAGCGGGCTGTTCTCTAAACCACTGGTGTCCGTGCATTATGCG 3300
                ************************************************************

R1              GATAATCACTGGGACAACAGGCCGGGAGGGAAGATGTTCGGATTCAACCCCGAAGCGGCG 3360
R2              GATAATCACTGGGACAACAGGCCGGGAGGGAAGATGTTCGGATTCAACCCCGAAGCGGCG 3360
                ************************************************************

R1              TCCATACTGGAGAGGAAATACCCGTTTACAAAAGGGAAGTGGAATACCAACAAGCAAATC 3420
R2              TCCATACTGGAGAGGAAATACCCGTTTACAAAAGGGAAGTGGAATACCAACAAGCAAATC 3420
                ************************************************************

R1              TGTGTGACTACTAGGAGGATTGAAGATTTTAACCCGAACACCAACATTATACCTGCCAAC 3480
R2              TGTGTGACTACTAGGAGGATTGAAGATTTTAACCCGAACACCAACATTATACCTGCCAAC 3480
                ************************************************************

R1              AGGAGACTACCGCATTCATTGGTGGCCGAACATCGCCCGGTAAAAGGGGAGAGGATGGAA 3540
R2              AGGAGACTACCGCATTCATTGGTGGCCGAACATCGCCCGGTAAAAGGGGAGAGGATGGAA 3540
                ************************************************************

R1              TGGTTGGTCAACAAAATAAATGGCCACCATGTGCTCCTGGTCAGCGGCTACAACCTCGTT 3600
R2              TGGTTGGTCAACAAAATAAATGGCCACCATGTGCTCCTGGTCAGCGGCTACAACCTCGTT 3600
                ************************************************************

R1              CTGCCCACTAAGAGAGTCACCTGGGTGGCGCCGCTGGGCATCCGGGGAGCTGACTACACA 3660
R2              CTGCCCACTAAGAGAGTCACCTGGGTGGCGCCGCTGGGCATCCGGGGAGCTGACTACACA 3660
                ************************************************************

R1              TACAACCTAGAGTTAGGCCTACCAGCAACGCTCGGTAGATATGACCTAGTGATTATAAAC 3720
R2              TACAACCTAGAGTTAGGCCTACCAGCAACGCTCGGTAGATATGACCTAGTGATTATAAAC 3720
                ************************************************************

R1              ATCCACACACCCTTTCGCATACATCATTACCAACAGTGCGTGGATCATGCAATGAAGCTG 3780
R2              ATCCACACACCCTTTCGCATACATCATTACCAACAGTGCGTGGATCATGCAATGAAGCTG 3780
                ************************************************************

R1              CAGATGCTCGGAGGAGACTCCCTGAGACTGCTCAAGCCGGGTGGTTCATTACTGATCAGG 3840
R2              CAGATGCTCGGAGGAGACTCCCTGAGACTGCTCAAGCCGGGTGGTTCATTACTGATCAGG 3840
                ************************************************************

R1              GCATACGGCTACGCAGACAGAACAAGCGAACGAGTAGTCTGCGTACTGGGACGCAAGTTT 3900
R2              GCATACGGCTACGCAGACAGAACAAGCGAACGAGTAGTCTGCGTACTGGGACGCAAGTTT 3900
                ************************************************************

R1              CGATCATCCAGAGCGTTGAAACCGCCGTGCGTCACTAGCAACACCGAGATGTTTTTCTTG 3960
R2              CGATCATCCAGAGCGTTGAAACCGCCGTGCGTCACTAGCAACACCGAGATGTTTTTCTTG 3960
                ************************************************************

R1              TTCAGCAACTTTGATAACGGCAGAAGGAACTTTACAACGCACGTAATGAACAACCAGCTG 4020
R2              TTCAGCAACTTTGATAACGGCAGAAGGAACTTTACAACGCACGTAATGAACAACCAGCTG 4020
                ************************************************************

R1              AATGCTGCTTTTGTTGGTCAGGCCACCCGAGCAGGGTGTGCACCGTCGTACCGGGTTAAA 4080
R2              AATGCTGCTTTTGTTGGTCAGGCCACCCGAGCAGGGTGTGCACCGTCGTACCGGGTTAAA 4080
                ************************************************************

R1              CGCATGGACATCGCAAAGAACGATGAAGAGTGCGTAGTCAACGCCGCCAACCCTCGTGGG 4140
R2              CGCATGGACATCGCAAG-AACGATGAAGAGTGCGTAGTCAACGCCGCCAACCCTCGTGGG 4139
                ****************. ******************************************

R1              CTACCAGGCGATGGCGTCTGTAAAGCAGTATACAAAAAATGGCCGGAGTCCTTCAAGAAC 4200
R2              CTACCAGGCGATGGCGTCTGTAAAGCAGTATACAAAAAATGGCCGGAGTCCTTCAAGAAC 4199
                ************************************************************

R1              AGTGCAACACCAGTGGGAACCGCAAAGACAGTCATGTGCGGTACATACCCGGTAATCCAT 4260
R2              AGTGCAACACCAGTGGGAACCGCAAAGACAGTCATGTGCGGTACATACCCGGTAATCCAT 4259
                ************************************************************

R1              GCAGTAGGACCTAATTTCTCAAATTACTCTGAGTCCGAAGGAGACCGGGAATTGGCAGCT 4320
R2              GCAGTAGGACCTAATTTCTCAAATTACTCTGAGTCCGAAGGAGACCGGGAATTGGCAGCT 4319
                ************************************************************

R1              GCTTACCGAGAAGTCGCTAAAGAGGTGACTAGACTAGGAGTAAACAGCGTAGCTATACCG 4380
R2              GCTTACCGAGAAGTCGCTAAAGAGGTGACTAGACTAGGAGTAAACAGCGTAGCTATACCG 4379
                ************************************************************

R1              CTCCTTTCCACCGGCGTGTACTCTGGAGGGAAAGACAGGCTGACTCAGTCATTAAACCAC 4440
R2              CTCCTTTCCACCGGCGTGTACTCTGGAGGGAAAGACAGGCTGACTCAGTCATTAAACCAC 4439
                ************************************************************

R1              CTTTTTACAGCATTAGACTCAACTGATGCAGATGTGGTTATCTACTGCCGCGACAAGGAG 4500
R2              CTTTTTACAGCATTAGACTCAACTGATGCAGATGTGGTTATCTACTGCCGCGACAAGGAG 4499
                ************************************************************

R1              TGGGAGAAGAAAATAGCCGAGGCCATACAAATGAGGACCCAAGTGGAACTACTAGATGAA 4560
R2              TGGGAGAAGAAAATAGCCGAGGCCATACAAATGAGGACCCAAGTGGAACTACTAGATGAA 4559
                ************************************************************

R1              CACATCTCTGTAGACTGCGATATCATCCGAGTGCACCCTGACAGCAGTTTGGCAGGTAGA 4620
R2              CACATCTCTGTAGACTGCGATATCATCCGAGTGCACCCTGACAGCAGTTTGGCAGGTAGA 4619
                ************************************************************

R1              AAAGGGTACAGCACTACAGAAGGTTCACTGTACTCCTACTTGGAAGGGACACGGTTCCAT 4680
R2              AAAGGGTACAGCACTACAGAAGGTTCACTGTACTCCTACTTGGAAGGGACACGGTTCCAT 4679
                ************************************************************

R1              CAGACGGCAGTGGACATGGCAGAAGTATACACCATGTGGCCAAAGCAGACGGAGGCTAAT 4740
R2              CAGACGGCAGTGGACATGGCAGAAGTATACACCATGTGGCCAAAGCAGACGGAGGCTAAT 4739
                ************************************************************

R1              GAACAAGTTTGCTTGTACGCATTGGGGGAAAGTATAGAATCAATCAGGCAAAAGTGCCCA 4800
R2              GAACAAGTTTGCTTGTACGCATTGGGGGAAAGTATAGAATCAATCAGGCAAAAGTGCCCA 4799
                ************************************************************

R1              GTGGATGACGCAGATGCATCGTCGCCCCCAAAAACCGTCCCGTGCCTCTGCCGTTATGCC 4860
R2              GTGGATGACGCAGATGCATCGTCGCCCCCAAAAACCGTCCCGTGCCTCTGCCGTTATGCC 4859
                ************************************************************

R1              ATGACACCCGAACGAGTCACCAGGCTTCGTATGAACCATGTCACAAACATAATAGTATGC 4920
R2              ATGACACCCGAACGAGTCACCAGGCTTCGTATGAACCATGTCACAAACATAATAGTATGC 4919
                ************************************************************

R1              TCATCATTCCCCCTTCCAAAGTATAAAATAGAAGGAGTGCAGAAAGTCAAGTGTTCTAAA 4980
R2              TCATCATTCCCCCTTCCAAAGTATAAAATAGAAGGAGTGCAGAAAGTCAAGTGTTCTAAA 4979
                ************************************************************

R1              GTGATGCTGTTCGACCATAACGTGCCATCACGCGTTAGTCCAAGGGAATATAAATCGCCT 5040
R2              GTGATGCTGTTCGACCATAACGTGCCATCACGCGTTAGTCCAAGGGAATATAAATCGCCT 5039
                ************************************************************

R1              CAGGAGACCGCACAAGAAGTAAGTTCGACCACGTCACTGACGCACAGCCAATTCGACCTT 5100
R2              CAGGAGACCGCACAAGAAGTAAGTTCGACCACGTCACTGACGCACAGCCAATTCGACCTT 5099
                ************************************************************

R1              AGCGTTGACGGTGAGGTACTGCCCGCTCCGTCTGACCTGGAAGCTGATGCTCCGATTTCG 5160
R2              AGCGTTGACGGTGAGGTACTGCCCGCTCCGTCTGACCTGGAAGCTGATGCTCCGATTTCG 5159
                ************************************************************

R1              GAGCCAACACCAGACGACAGAGCGGTACTTACTTTGCCTCCCACGATTGAAAATTTTTCG 5220
R2              GAGCCAACACCAGACGACAGAGCGGTACTTACTTTGCCTCCCACGATTGAAAATTTTTCG 5219
                ************************************************************

R1              GCTGTGTCAGACTGGGTAATGAATACCGCGCCAGTCGCACCACCCAGAAGAAGACGTGGG 5280
R2              GCTGTGTCAGACTGGGTAATGAATACCGCGCCAGTCGCACCACCCAGAAGAAGACGTGGG 5279
                ************************************************************

R1              AAAAACTTGAATGTCACCTGCGACGAGAGAGAAGGGAACGTACTTCCCATGGCTAGCGTT 5340
R2              AAAAACTTGAATGTCACCTGCGACGAGAGAGAAGGGAACGTACTTCCCATGGCTAGCGTT 5339
                ************************************************************

R1              CGGTTTTTCAGAGCGGATCTGCACTCCATCGTACAGGAAACGGCAGAGATACGCGATACG 5400
R2              CGGTTTTTCAGAGCGGATCTGCACTCCATCGTACAGGAAACGGCAGAGATACGCGATACG 5399
                ************************************************************

R1              GCCGCGTCCCTCCAGGCGCCCCTGAGTGTCGCTACAGAACCAAATCAACTGCCGATCTCA 5460
R2              GCCGCGTCCCTCCAGGCGCCCCTGAGTGTCGCTACAGAACCAAATCAACTGCCGATCTCA 5459
                ************************************************************

R1              TTTGGAGCACCAAACGAGACTTTCCCCATAACGTTCGGGGATTTTGATGAAGGGGAGATT 5520
R2              TTTGGAGCACCAAACGAGACTTTCCCCATAACGTTCGGGGATTTTGATGAAGGGGAGATT 5519
                ************************************************************

R1              GAAAGCTTGTCCTCTGAGTTACTGACCTTTGGGGACTTCTCGCCGGGCGAAGTGGATGAC 5580
R2              GAAAGCTTGTCCTCTGAGTTACTGACCTTTGGGGACTTCTCGCCGGGCGAAGTGGATGAC 5579
                ************************************************************

R1              CTGACAGACAGCGACTGGTCCACGTGTTCAGACACGGACGACGAATTATGACTAGATAGG 5640
R2              CTGACAGACAGCGACTGGTCCACGTGTTCAGACACGGACGACGAATTANGACTAGATAGG 5639
                ************************************************.***********

R1              GCAGGTGGGTACATATTCTCATCCGACACCGGCCCCGGCCACCTGCAACAGAGGTCTGTC 5700
R2              GCAGGTGGGTACATATTCTCATCCGACACCGGCCCCGGCCACCTGCAACAGAGGTCTGTC 5699
                ************************************************************

R1              CGTCAGACAGTACTGCCGGTAAATACCTTGGAGGAAGTTCAGGAGGAGAAATGTTACCCA 5760
R2              CGTCAGACAGTACTGCCGGTAAATACCTTGGAGGAAGTTCAGGAGGAGAAATGTTACCCA 5759
                ************************************************************

R1              CCTAAGTTGGATGAAGTGAAAGAGCAGTTGTTACTTAAGAAACTCCAGGAAAGTGCGTCC 5820
R2              CCTAAGTTGGATGAAGTGAAAGAGCAGTTGTTACTTAAGAAACTCCAGGAAAGTGCGTCC 5819
                ************************************************************

R1              ATGGCTAACAGAAGCAGGTACCAATCCCGCAAAGTAGAGAACATGAAAGCAACAATAGTC 5880
R2              ATGGCTAACAGAAGCAGGTACCAATCCCGCAAAGTAGAGAACATGAAAGCAACAATAGTC 5879
                ************************************************************

R1              CAAAGGCTGAAGGGTGGTTGCAAACTTTATTTAATGTCGGAGACTCCGAAAGTTCCTACC 5940
R2              CAAAGGCTGAAGGGTGGTTGCAAACTTTATTTAATGTCGGAGACTCCGAAAGTTCCTACC 5939
                ************************************************************

R1              TACCGAACTACATATCCGGCACCAGTGTACTCACCCCCAATCAATATCCGACTGTCCAAC 6000
R2              TACCGAACTACATATCCGGCACCAGTGTACTCACCCCCAATCAATATCCGACTGTCCAAC 5999
                ************************************************************

R1              CCCGAGTCTGCTGTGGCAGCGTGCAATGAGTTCCTAGCAAGGAACTATCCGACAGTTGCG 6060
R2              CCCGAGTCTGCTGTGGCAGCGTGCAATGAGTTCCTAGCAAGGAACTATCCGACAGTTGCG 6059
                ************************************************************

R1              TCGTACCAAATCACTGATGAGTACGATGCATACCTGGACATGGTGGACGGGTCGGAAAGT 6120
R2              TCGTACCAAATCACTGATGAGTACGATGCATACCTGGACATGGTGGACGGGTCGGAAAGT 6119
                ************************************************************

R1              TGCCTTGACCGGGCGACGTTCAATCCATCAAAGCTTAGAAGTTATCCAAAACAGCACTCC 6180
R2              TGCCTTGACCGGGCGACGTTCAATCCATCAAAGCTTAGAAGTTATCCAAAACAGCACTCC 6179
                ************************************************************

R1              TACCATGCACCCACAATCAGAAGTGCCGTACCTTCCCCGTTCCAGAATACGTTGCAGAAC 6240
R2              TACCATGCACCCACAATCAGAAGTGCCGTACCTTCCCCGTTCCAGAATACGTTGCAGAAC 6239
                ************************************************************

R1              GTACTGGCTGCTGCCACGAAAAGAAATTGCAACGTCACACAGATGAGAGAACTGCCTACT 6300
R2              GTACTGGCTGCTGCCACGAAAAGAAATTGCAACGTCACACAGATGAGAGAACTGCCTACT 6299
                ************************************************************

R1              TTGGATTCAGCGGTATTTAATGTTGAGTGCTTTAAAAAATTTGCGTGCAATCAAGAATAC 6360
R2              TTGGATTCAGCGGTATTTAATGTTGAGTGCTTTAAAAAATTTGCGTGCAATCAAGAATAC 6359
                ************************************************************

R1              TGGAAGGAATTTGCCGCCAGTCCTATTAGGATAACGACTGAGAACTTGACAACTTATGTC 6420
R2              TGGAAGGAATTTGCCGCCAGTCCTATTAGGATAACGACTGAGAACTTGACAACTTATGTC 6419
                ************************************************************

R1              ACAAAACTAAAAGGACCAAAAGCAGCAGCATTGTTTGCCAAGACACATAACCTGCTACCA 6480
R2              ACAAAACTAAAAGGACCAAAAGCAGCAGCATTGTTTGCCAAGACACATAACCTGCTACCA 6479
                ************************************************************

R1              CTGCAGGAGGTACCGATGGACAGGTTTACTGTAGACATGAAAAGGGACGTGAAGGTGACT 6540
R2              CTGCAGGAGGTACCGATGGACAGGTTTACTGTAGACATGAAAAGGGACGTGAAGGTGACT 6539
                ************************************************************

R1              CCGGGGACGAAGCACACTGAGGAAAGACCTAAAGTGCAGGTCATACAGGCAGCCGAACCT 6600
R2              CCGGGGACGAAGCACACTGAGGAAAGACCTAAAGTGCAGGTCATACAGGCAGCCGAACCT 6599
                ************************************************************

R1              TTGGCAACAGCGTATCTGTGTGGGATCCACAGAGAGTTGGTCAGAAGGCTGAATGCAGTC 6660
R2              TTGGCAACAGCGTATCTGTGTGGGATCCACAGAGAGTTGGTCAGAAGGCTGAATGCAGTC 6659
                ************************************************************

R1              CTTCTACCTAATGTACACACGCTGTTTGACATGTCTGCCGAGGACTTTGACGCCATTATT 6720
R2              CTTCTACCTAATGTACACACGCTGTTTGACATGTCTGCCGAGGACTTTGACGCCATTATT 6719
                ************************************************************

R1              GCCGCGCACTTCAAGCCAGGGGACGCCGTATTGGAAACCGATATAGCCTCCTTTGACAAG 6780
R2              GCCGCGCACTTCAAGCCAGGGGACGCCGTATTGGAAACCGATATAGCCTCCTTTGACAAG 6779
                ************************************************************

R1              AGCCAAGACGACTCGTTGGCGCTCACTGCTCTAATGTTGCTAGAGGATTTGGGGGTGGAT 6840
R2              AGCCAAGACGACTCGTTGGCGCTCACTGCTCTAATGTTGCTAGAGGATTTGGGGGTGGAT 6839
                ************************************************************

R1              CATCCCCTGTTGGACTTGATAGAGGCTGCCTTCGGGGAGATCTCCAGCTGCCACCTACCG 6900
R2              CATCCCCTGTTGGACTTGATAGAGGCTGCCTTCGGGGAGATCTCCAGCTGCCACCTACCG 6899
                ************************************************************

R1              ACGGGCACCCGTTTTAAGTTCGGCGCCATGATGAAGTCTGGTATGTTCCTAACCCTGTTC 6960
R2              ACGGGCACCCGTTTTAAGTTCGGCGCCATGATGAAGTCTGGTATGTTCCTAACCCTGTTC 6959
                ************************************************************

R1              GTCAATACACTGCTAAACATCACCATAGCCAGCCGAGTGCTGGAGGACCGCTTGACAAAG 7020
R2              GTCAATACACTGCTAAACATCACCATAGCCAGCCGAGTGCTGGAGGACCGCTTGACAAAG 7019
                ************************************************************

R1              TCTGCGTGCGCGGCCTTCATCGGCGACGACAATATAATACATGGGGTTGTCTCTGACGAA 7080
R2              TCTGCGTGCGCGGCCTTCATCGGCGACGACAATATAATACATGGGGTTGTCTCTGACGAA 7079
                ************************************************************

R1              CTGATGGCAGCAAGATGCGCTACATGGATGAACATGGAAGTGAAGATCATAGATGCGGTC 7140
R2              CTGATGGCAGCAAGATGCGCTACATGGATGAACATGGAAGTGAAGATCATAGATGCGGTC 7139
                ************************************************************

R1              GTGTCTCAGAAAGCCCCGTACTTCTGCGGAGGGTTTATACTGTATGATACAGTAGCAGGC 7200
R2              GTGTCTCAGAAAGCCCCGTACTTCTGCGGAGGGTTTATACTGTATGATACAGTAGCAGGC 7199
                ************************************************************

R1              ACGGCCTGCAGAGTGGCAGACCCGCTAAAGCGGCTGTTCAAGCTGGGCAAACCGCTGGCG 7260
R2              ACGGCCTGCAGAGTGGCAGACCCGCTAAAGCGGCTGTTCAAGCTGGGCAAACCGCTGGCG 7259
                ************************************************************

R1              GCGGGAGATGAACAAGACGACGACAGAAGACGTGCACTGGCTGACGAAGTGGTTAGATGG 7320
R2              GCGGGAGATGAACAAGACGACGACAGAAGACGTGCACTGGCTGACGAAGTGGTTAGATGG 7319
                ************************************************************

R1              CAACGAACAGGGCTAACTGATGAGCTAGAAAAAGCGGTACACTCCAGGTATGAAGTGCAG 7380
R2              CAACGAACAGGGCTAACTGATGAGCTAGAAAAAGCGGTACACTCCAGGTATGAAGTGCAG 7379
                ************************************************************

R1              GGCATATCTGTCGTGGTAATGTCTATGGCCACCTTTGCAAGCTCTAGATCTAACTTTGAG 7440
R2              GGCATATCTGTCGTGGTAATGTCTATGGCCACCTTTGCAAGCTCTAGATCTAACTTTGAG 7439
                ************************************************************

R1              AAGCTCAGAGGACCCATCGTAACCCTGTACGGTGGTCCTAAATAGGTACGCACTACAGCT 7500
R2              AAGCTCAGAGGACCCATCGTAACCCTGTACGGTGGTCCTAAATAGGTACGCACTACAGCT 7499
                ************************************************************

R1              ACCTATTTCGTCAGAAACCAATCGCAGCTACTTGCATACCTACCAGCTACAATGGAGTTC 7560
R2              ACCTATTTCGTCAGAAACCAATCGCAGCTACTTGCATACCTACCAGCTACAATGGAGTTC 7559
                ************************************************************

R1              ATCCCGACGCAAACTTTCTATAACAGAAGGTACCAACCCCGACCCTGGGCCCCACGCCCT 7620
R2              ATCCCGACGCAAACTTTCTATAACAGAAGGTACCAACCCCGACCCTGGGCCCCACGCCCT 7619
                ************************************************************

R1              ACAATTCAAGTAATTAGACCTAGACCACGTCCACAGAGGCAGGCTGGGCAACTCGCCCAG 7680
R2              ACAATTCAAGTAATTAGACCTAGACCACGTCCACAGAGGCAGGCTGGGCAACTCGCCCAG 7679
                ************************************************************

R1              CTGATCTCTGCAGTCAACAAATTGACCATGCGCGCGGTACCTCAACAGAAGCCTCGCAGA 7740
R2              CTGATCTCTGCAGTCAACAAATTGACCATGCGCGCGGTACCTCAACAGAAGCCTCGCAGA 7739
                ************************************************************

R1              AATCGGAAAAACAAGAAGCAAAGGCAGAAGAAGCAGGCGCCGCAAAACGACCCAAAGCAA 7800
R2              AATCGGAAAAACAAGAAGCAAAGGCAGAAGAAGCAGGCGCCGCAAAACGACCCAAAGCAA 7799
                ************************************************************

R1              AAGAAGCAACCACCACAAAAGAAGCCGGCTCAAAAGAAGAAGAAACCAGGCCGTAGGGAG 7860
R2              AAGAAGCAACCACCACAAAAGAAGCCGGCTCAAAAGAAGAAGAAACCAGGCCGTAGGGAG 7859
                ************************************************************

R1              AGAATGTGCATGAAAATTGAAAATGATTGCATCTTCGAAGTCAAGCATGAAGGCAAAGTG 7920
R2              AGAATGTGCATGAAAATTGAAAATGATTGCATCTTCGAAGTCAAGCATGAAGGCAAAGTG 7919
                ************************************************************

R1              ATGGGCTACGCATGCCTGGTGGGGGATAAAGTAATGAAACCAGCACATGTGAAGGGAACT 7980
R2              ATGGGCTACGCATGCCTGGTGGGGGATAAAGTAATGAAACCAGCACATGTGAAGGGAACT 7979
                ************************************************************

R1              ATCGACAATGCCGATTTGGCTAAACTGGCCTTCAAGCGGTCGTCTAAATACGATCTTGAA 8040
R2              ATCGACAATGCCGATTTGGCTAAACTGGCCTTCAAGCGGTCGTCTAAATACGATCTTGAA 8039
                ************************************************************

R1              TGTGCACAGATACCAGTGCACATGAAGTCTGATGCCTCGAAGTTTACCCACGAGAAACCC 8100
R2              TGTGCACAGATACCAGTGCACATGAAGTCTGATGCCTCGAAGTTTACCCACGAGAAACCC 8099
                ************************************************************

R1              GAGGGGTACTATAACTGGCATCACGGAGCAGTGCAGTATTCAGGAGGCCGGTTCACTATC 8160
R2              GAGGGGTACTATAACTGGCATCACGGAGCAGTGCAGTATTCAGGAGGCCGGTTCACTATC 8159
                ************************************************************

R1              CCGACGGGTGCAGGCAAGCCGGGAGACAGCGGCAGACCGATCTTCGACAACAAAGGACGG 8220
R2              CCGACGGGTGCAGGCAAGCCGGGAGACAGCGGCAGACCGATCTTCGACAACAAAGGACGG 8219
                ************************************************************

R1              GTGGTGGCCATCGTCCTAGGAGGGGCCAACGAAGGTGCCCGCACGGCCCTCTCCGTGGTG 8280
R2              GTGGTGGCCATCGTCCTAGGAGGGGCCAACGAAGGTGCCCGCACGGCCCTCTCCGTGGTG 8279
                ************************************************************

R1              ACGTGGAACAAAGACATCGTCACAAAAATTACCCCTGAGGGAGCCGAAGAGTGGAGCCTC 8340
R2              ACGTGGAACAAAGACATCGTCACAAAAATTACCCCTGAGGGAGCCGAAGAGTGGAGCCTC 8339
                ************************************************************

R1              GCCCTCCCGGTCTTGTGCCTGTTGGCAAACACCACATTCCCCTGCTCTCAGCCGCCTTGC 8400
R2              GCCCTCCCGGTCTTGTGCCTGTTGGCAAACACCACATTCCCCTGCTCTCAGCCGCCTTGC 8399
                ************************************************************

R1              ACACCCTGCTGCTACGAAAAGGAACCGGAAAGCACCTTGCGCATGCTTGAGGACAACGTG 8460
R2              ACACCCTGCTGCTACGAAAAGGAACCGGAAAGCACCTTGCGCATGCTTGAGGACAACGTG 8459
                ************************************************************

R1              ATGAGACCCGGATACTACCAGCTGCTAAAAGCATCGCTGACTTGTTCTCCCCACCGCCAA 8520
R2              ATGAGACCCGGATACTACCAGCTGCTAAAAGCATCGCTGACTTGTTCTCCCCACCGCCAA 8519
                ************************************************************

R1              AGACGCAGTACTAAGGACAATTTTAATGTCTATAAAGCTACAAGACCATATCTAGCTCAT 8580
R2              AGACGCAGTACTAAGGACAATTTTAATGTCTATAAAGCTACAAGACCATATCTAGCTCAT 8579
                ************************************************************

R1              TGTCCTGACTGCGGAGAAGGGCATTCGTGCCACAGCCCTATCGCATTGGAGCGCATCAGA 8640
R2              TGTCCTGACTGCGGAGAAGGGCATTCGTGCCACAGCCCTATCGCATTGGAGCGCATCAGA 8639
                ************************************************************

R1              AATGAAGCAACGGACGGAACGCTGAAAATCCAGGTCTCTTTGCAGATCGGGATAAAGACA 8700
R2              AATGAAGCAACGGACGGAACGCTGAAAATCCAGGTCTCTTTGCAGATCGGGATAAAGACA 8699
                ************************************************************

R1              GATGACAGCCACGATTGGACCAAGCTGCGCTATATGGATAGCCATACGCCAGCGGACGCG 8760
R2              GATGGCAGCCACGATTGGACCAAGCTGCGCTATATGGATAGCCATACGCCAGCGGACGCG 8759
                ****.*******************************************************

R1              GAGCGAGCCGGATTGCTTGTAAGGACTTCAGCACCGTGCACGATCACCGGGACCATGGGA 8820
R2              GAGCGAGCCGGATTGCTTGTAAGGACTTCAGCACCGTGCACGATCACCGGGACCATGGGA 8819
                ************************************************************

R1              CACTTTATTCTCGCCCGATGCCCGAAAGGAGAGACGCTGACAGTGGGATTTACGGACAGC 8880
R2              CACTTTATTCTCGCCCGATGCCCGAAAGGAGAGACGCTGACAGTGGGATTTACGGACAGC 8879
                ************************************************************

R1              AGAAAGATCAGCCACACATGCACACACCCGTTCCATCATGAACCACCTGTGATAGGTAGG 8940
R2              AGAAAGATCAGCCACACATGCACACACCCGTTCCATCATGAACCACCTGTGATAGGTAGG 8939
                ************************************************************

R1              GAGAGGTTCCACTCTCGACCACAACATGGTAAAGAGTTACCTTGCAGCACGTACGTGCAG 9000
R2              GAGAGGTTCCACTCTCGACCACAACATGGTAAAGAGTTACCTTGCAGCACGTACGTGCAG 8999
                ************************************************************

R1              AGCACCGCTGCCACTGCCGAGGAGATAGAGGTGCATATGCCCCCAGATACTCCTGACCGC 9060
R2              AGCACCGCTGCCACTGCCGAGGAGATAGAGGTGCATATGCCCCCAGATACTCCTGACCGC 9059
                ************************************************************

R1              ACGCTGATGACGCAGCAGTCTGGCAACGTGAAGATCACAGTTAATGGGCAGACGGTGCGG 9120
R2              ACGCTGATGACGCAGCAGTCTGGCAACGTGAAGATCACAGTTAATGGGCAGACGGTGCGG 9119
                ************************************************************

R1              TACAAGTGCAACTGCGGCGGCTCAAACGAGGGACTGACAACCACAGACAAAGTGATCAAT 9180
R2              TACAAGTGCAACTGCGGCGGCTCAAACGAGGGACTGACAACCACAGACAAAGTGATCAAT 9179
                ************************************************************

R1              AACTGCAAAATTGATCAGTGCCATGCTGCAGTCACTAATCACAAGAAGTGGCAATACAAC 9240
R2              AACTGCAAAATTGATCAGTGCCATGCTGCAGTCACTAATCACAAGAAGTGGCAATACAAC 9239
                ************************************************************

R1              TCCCCTTTAGTCCCGCGTAACGCTGAACTCGGGGACCGTAAAGGAAAGATTCACATCCCA 9300
R2              TCCCCTTTAGTCCCGCGTAACGCTGAACTCGGGGACCGTAAAGGAAAGATTCACATCCCA 9299
                ************************************************************

R1              TTCCCATTGGCAAACGTGACTTGCAGAGTGCCAAAAGCAAGAAACCCCACAGTAACGTAC 9360
R2              TTCCCATTGGCAAACGTGACTTGCAGAGTGCCAAAAGCAAGAAACCCCACAGTAACGTAC 9359
                ************************************************************

R1              GGAAAAAACCAAGTCACCATGCTGCTGTATCCTGACCATCCGACACTCTTGTCTTATCGT 9420
R2              GGAAAAAACCAAGTCACCATGCTGTTGTATCCTGACCATCCGACACTCTTGTCTTATCGT 9419
                ************************ ***********************************

R1              AACATGGGACAGGAACCAAATTACCACGAGGAGTGGGTGACACACAAGAAGGAGGTTACC 9480
R2              AACATGGGACAGGAACCAAATTACCACGAGGAGTGGGTGACACACAAGAAGGAGGTTACC 9479
                ************************************************************

R1              TTGACCGTGCCTACTGAGGGTCTGGAGGTCACTTGGGGCAACAACGAACCATACAAGTAC 9540
R2              TTGACCGTGCCTACTGAGGGTCTGGAGGTCACTTGGGGCAACAACGAACCATACAAGTAC 9539
                ************************************************************

R1              TGGCCGCAGATGTCTACGAACGGTACTGCTCATGGTCACCCACATGAGATAATCTTGTAC 9600
R2              TGGCCGCAGATGTCTACGAACGGTACTGCTCATGGTCACCCACATGAGATAATCTTGTAC 9599
                ************************************************************

R1              TATTATGAGCTGTACCCCACTATGACTGTAATCATTGTGTCGGTGGCCTCGTTCGTGCTT 9660
R2              TATTATGAGCTGTACCCCACTATGACTGTAATCATTGTGTCGGTGGCCTCGTTCGTGCTT 9659
                ************************************************************

R1              CTGTCGATGGTGGGCACAGCAGTGGGGATGTGTGTGTGCGCACGGCGCAGATGCATTACA 9720
R2              CTGTCGATGGTGGGCACAGCAGTGGGGATGTGTGTGTGCGCACGGCGCAGATGCATTACA 9719
                ************************************************************

R1              CCATATGAATTAACACCAGGAGCCACCGTTCCCTTTCTGCTCAGCCTGCTATGTTGCGTC 9780
R2              CCATATGAATTAACACCAGGAGCCACCGTTCCCTTTCTGCTCAGCCTGCTATGTTGCGTC 9779
                ************************************************************

R1              AGAACGACCAAGGCGGCCACATATTACGAGGCTGTGGCATATCTATGGAACGAACAGCAG 9840
R2              AGAACGACCAAGGCGGCCACATATTACGAGGCTGTGGCATATCTATGGAACGAACAGCAG 9839
                ************************************************************

R1              CCCCTGTTCTGGTTGCAGGCTCTTATCCCGCTGGCCGCCTTGATCGTCCTGTGCAACTGT 9900
R2              CCCCTGTTCTGGTTGCAGGCTCTTATCCCGCTGGCCGCCTTGATCGTCCTGTGCAACTGT 9899
                ************************************************************

R1              CTGAAACTCTTGCCATGCTGCTGTAAGACCCTGGCTTTTTTAGCCGTAATGAGCATCGGT 9960
R2              CTGAAACTCTTGCCATGCTGCTGTAAGACCCTGGCTTTTTTAGCCGTAATGAGCATCGGT 9959
                ************************************************************

R1              GCCCACACTGTGAGCGCGTACGAACACGTAACAGTGATCCCGAACACGGTGGGAGTACCG 10020
R2              GCCCACACTGTGAGCGCGTACGAACACGTAACAGTGATCCCGAACACGGTGGGAGTACCG 10019
                ************************************************************

R1              TATAAGACTCTTGTCAACAGACCGGGTTACAGCCCCATGGTATTGGAGATGGAGCTACAA 10080
R2              TATAAGACTCTTGTCAACAGACCGGGTTACAGCCCCATGGTATTGGAGATGGAGCTACAA 10079
                ************************************************************

R1              TCGGTCACCTTGGAACCAACACTGTCACTTGACTACATCACGTGCGAGTACAAAACTGTC 10140
R2              TCGGTCACCTTGGAACCAACACTGTCACTTGACTACATCACGTGCGAGTACAAAACTGTC 10139
                ************************************************************

R1              ATCCCCTCCCCGTACGTGAAGTGCTGTGGTACAGCAGAGTGCAAGGACAAGAGCCTACCA 10200
R2              ATCCCCTCCCCGTACGTGAAGTGCTGTGGTACAGCAGAGTGCAAGGACAAGAGCCTACCA 10199
                ************************************************************

R1              GACTACAGCTGCAAGGTCTTTACTGGAGTCTACCCATTTATGTGGGGCGGCGCCTACTGC 10260
R2              GACTACAGCTGCAAGGTCTTTACTGGAGTCTACCCATTTATGTGGGGCGGCGCCTACTGC 10259
                ************************************************************

R1              TTTTGCGACGCCGAAAATACGCAATTGAGCGAGGCACATGTAGAGAAATCTGAATCTTGC 10320
R2              TTTTGCGACGCCGAAAATACGCAATTGAGCGAGGCACATGTAGAGAAATCTGAATCTTGC 10319
                ************************************************************

R1              AAAACAGAGTTTGCATCGGCCTACAGAGCCCACACCGCATCGGCGTCGGCGAAGCTCCGC 10380
R2              AAAACAGAGTTTGCATCGGCCTACAGAGCCCACACCGCATCGGCGTCGGCGAAGCTCCGC 10379
                ************************************************************

R1              GTCCTTTACCAAGGAAACAACATTACTGTAGCTGCCTACGCTAACGGCGACCATGCCGTC 10440
R2              GTCCTTTACCAAGGAAACAACATTACTGTAGCTGCCTACGCTAACGGCGACCATGCCGTC 10439
                ************************************************************

R1              ACAGTAAAGGACGCCAAGTTTGTCGTGGGACCAATGTCCTCCGCCTGGACACCTTTTGAC 10500
R2              ACAGTAAAGGACGCCAAGTTTGTCGTGGGACCAATGTCCTCCGCCTGGACACCTTTTGAC 10499
                ************************************************************

R1              AACAAAATCGTGGTGTACAAAGGCGACGTCTACAACATGGACTACCCACCTTTTGGCGCA 10560
R2              AACAAAATCGTGGTGTACAAAGGCGACGTCTACAACATGGACTACCCACCTTTTGGCGCA 10559
                ************************************************************

R1              GGAAGACCAGGACAATTTGGTGACATTCAAAGTCGTACACCGGAAAGTAAAGACGTTTAT 10620
R2              GGAAGACCAGGACAATTTGGTGACATTCAAAGTCGTACACCGGAAAGTAAAGACGTTTAT 10619
                ************************************************************

R1              GCCAACACTCAGTTGGTACTACAGAGGCCAGCAGCAGGCACGGTACATGTACCATACTCT 10680
R2              GCCAACACTCAGTTGGTACTACAGAGGCCAGCAGCAGGCACGGTACATGTACCATACTCT 10679
                ************************************************************

R1              CAGGCACCATCTGGCTTCAAGTATTGGCTGAAGGAACGAGGAGCATCGCTACAGCACACG 10740
R2              CAGGCACCATCTGGCTTCAAGTATTGGCTGAAGGAACGAGGAGCATCGCTACAGCACACG 10739
                ************************************************************

R1              GCACCGTTCGGTTGCCAGATTGCGACAAACCCGGTAAGAGCTGTAAATTGCGCTGTGGGG 10800
R2              GCACCGTTCGGTTGCCAGATTGCGACAAACCCGGTAAGAGCTGTAAATTGCGCTGTGGGG 10799
                ************************************************************

R1              AACATACCAATTTCCATCGACATACCGGATGCGGCCTTTACTAGGGTTGTCGATGCACCC 10860
R2              AACATACCAATTTCCATCGACATACCGGATGCGGCCTTTACTAGGGTTGTCGATGCACCC 10859
                ************************************************************

R1              TCTGTAACGGACATGTCATGCGAAGTACCAGCCTGCACTCACTCCTCCGACTTTGGGGGC 10920
R2              TCTGTAACGGACATGTCATGCGAAGTACCAGCCTGCACTCACTCCTCCGACTTTGGGGGC 10919
                ************************************************************

R1              GTCGCCATCATCAAATATACAGCTAGCAAGAAAGGTAAATGTGCAGTACATTCGATGACC 10980
R2              GTCGCCATCATCAAATATACAGCTAGCAAGAAAGGTAAATGTGCAGTACATTCGATGACC 10979
                ************************************************************

R1              AACGCCGTTACCATTCGAGAAGCCGACGTAGAAGTAGAGGGGAATTCCCAGCTGCAAATA 11040
R2              AACGCCGTTACCATTCGAGAAGCCGACGTAGAAGTAGAGGGGAATTCCCAGCTGCAAATA 11039
                ************************************************************

R1              TCCTTCTCAACAGCCTTGGCAAGCGCCGAGTTTCGCGTGCAAGTGTGCTCCACACAAGTA 11100
R2              TCCTTCTCAACAGCCTTGGCAAGCGCCGAGTTTCGCGTGCAAGTGTGCTCCACACAAGTA 11099
                ************************************************************

R1              CACTGCGCAGCCGCATGCCACCCTCCAAAGGACCACATAGTCAATTACCCAGCATCACAC 11160
R2              CACTGCGCAGCCGCATGCCACCCTCCAAAGGACCACATAGTCAATTACCCAGCATCACAC 11159
                ************************************************************

R1              ACCACCCTTGGGGTCCAGGATATATCCACAACGGCAATGTCTTGGGTGCAGAAGATTACG 11220
R2              ACCACCCTTGGGGTCCAGGATATATCCACAACGGCAATGTCTTGGGTGCAGAAGATTACG 11219
                ************************************************************

R1              GGAGGAGTAGGATTAATTGTTGCTGTTGCTGCCTTAATTTTAATTGTGGTGCTATGCGTG 11280
R2              GGAGGAGTAGGATTAATTGTTGCTGTTGCTGCCTTAATTTTAATTGTGGTGCTATGCGTG 11279
                ************************************************************

R1              TCGTTTAGCAGGCACTAAACTGATGATAAGGCACGAAATAACTAAACAGCAAAAGTAGAA 11340
R2              TCGTTTAGCAGGCACTAAACTGATGATAAGGCACGAAATAACTAAACAGCAAAAGTAGAA 11339
                ************************************************************

R1              AGTACATAACCAGGTATATGTGCCCCCTAAGAGGCACAATATATATAGCTAAGCACTATT 11400
R2              AGTACATAACCAGGTATATGTGCCCCCTAAGAGGCACAATATATATAGCTAAGCACTATT 11399
                ************************************************************

R1              AGATCAAAGGGCTATACAACCCCTGAATAGTAACAAAACACAAAAATCAATAAAAATCAT 11460
R2              AGATCAAAGGGCTATACAACCCCTGAATAGTAACAAAACACAAAAATCAATAAAAATCAT 11459
                ************************************************************

R1              AAAAAGAAAAATCTCATAAACAGGTATACGTGTCCCCTAAGAGACACATTGTATGTAGGT 11520
R2              AAAAAGAAAAATCTCATAAACAGGTATACGTGTCCCCTAAGAGACACATTGTATGTAGGT 11519
                ************************************************************

R1              AGTAAGTATAGATCAAAGGGCTATATTAACCCCTGAATAGTAACAAAACACAAAAACAAT 11580
R2              AGTAAGTATAGATCAAAGGGCTATATTAACCCCTGAATAGTAACAAAACACAAAAACAAT 11579
                ************************************************************

R1              AAAAACTACAAAATAGAAAATCTATAAATAAAAGTAGTTCAAAGGGCTACAAAACCCCTG 11640
R2              AAAAACTACAAAATAGAAAATCTATAAATAAAAGTAGTTCAAAGGGCTACAAAACCCCTG 11639
                ************************************************************

R1              AATAGTAACAAAACATAAAATGTAATAAAAATTAAGTGTGTACCCAAAAGAGGTACAGTA 11700
R2              AATAGTAACAAAACATAAAATGTAATAAAAATTAAGTGTGTACCCAAAAGAGGTACAGTA 11699
                ************************************************************

R1              AGAATCAGTGAATATCACAATTGGCAACGAGAAGAGACGTAGGTATTTAAGCTTCCTAAA 11760
R2              AGAATCAGTGAATATCACAATTGGCAACGAGAAGAGACGTAGGTATTTAAGCTTCCTAAA 11759
                ************************************************************

R1              AGCAGCCGAACTCACTTTGAGACGTAGGCATAGCATACCGAACTCTTCCACTATTCTCCG 11820
R2              AGCAGCCGAACTCACTTTGAGACGTAGGCATAGCATACCGAACTCTTCCACTATTCTCCG 11819
                ************************************************************

R1              AACCCACAGGGACGTAGGAGATGT 11844
R2              AACCCACAGGGACGTAGGAGATGT 11843
                ************************


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