Dear Ethan, <br><br>I also need to impliment Pise interface for Several bioinfo program to be used internally for a bioinformatics course. It will be nice If you can explain - step-by-step . <br><br>Cheers, <br>Shameer Khadar
<br><br><br><div><span class="gmail_quote">On 10/20/06, <b class="gmail_sendername">Ethan Strauss</b> <<a href="mailto:ethan.strauss@promega.com">ethan.strauss@promega.com</a>> wrote:</span><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
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<div dir="ltr" align="left"><span><font color="#0000ff" face="Verdana" size="2">Hi, </font></span></div>
<div dir="ltr" align="left"><span> <font color="#0000ff" face="Verdana" size="2">I am working with a PISE interface for BLAST
right now. I don't pretend to be know what I am doing, but I am doing something
:-)</font></span></div>
<div dir="ltr" align="left"><span> <font color="#0000ff" face="Verdana" size="2">Anyway, I could send you the interface I have
and you could at least use it as a starting point. Alternately, you could take a
look at <a href="http://www.pasteur.fr/recherche/unites/sis/Pise/XML/" target="_blank" onclick="return top.js.OpenExtLink(window,event,this)">http://www.pasteur.fr/recherche/unites/sis/Pise/XML/</a>.
There is an example there...</font></span></div>
<div dir="ltr" align="left"><span><font color="#0000ff" face="Verdana" size="2">Ethan</font></span></div><br>
<div dir="ltr" align="left" lang="en-us">
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<font face="Tahoma" size="2"><b>From:</b>
bio_bulletin_board-bounces+ethan.strauss=<a href="mailto:promega.com@bioinformatics.org" target="_blank" onclick="return top.js.OpenExtLink(window,event,this)">promega.com@bioinformatics.org</a>
[mailto:<a href="mailto:bio_bulletin_board-bounces+ethan.strauss=promega.com@bioinformatics.org" target="_blank" onclick="return top.js.OpenExtLink(window,event,this)">bio_bulletin_board-bounces+ethan.strauss=promega.com@bioinformatics.org
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<b>On Behalf Of </b>Samantha Fox<br><b>Sent:</b> Thursday, October 19, 2006
10:40 AM<br><b>To:</b> The general forum at
Bioinformatics.Org<br><b>Subject:</b> [BiO BB] PISE interface for
blast<br></font><br></div><div><span class="e" id="q_10e662fe0c8dc61c_1">
<div></div><br>Hi,<br>any of you familiar with generating PISE interface for a
database that I wish to blast.<br>Do we have to write a separate xml for that ?
Any help or suggestion would be welcome.<br><br>Thanks,<br>~S<br></span></div></div>
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<br><br></blockquote></div><br>