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<font face="Tahoma">Hello,<br>
<br>
I have used <b>Biolinux 5</b> for a three day training session I
organized at VIB (<a class="moz-txt-link-abbreviated" href="http://www.bits.vib.be">www.bits.vib.be</a>).<br>
It helped us a lot - thanks. During the training we started with
installing Biolinux5 as a virtual machine (virtualbox).<br>
Updates were not performed. This vm was used during the whole course.<br>
<br>
One question though: although the emboss GUI was present, we had to
install emboss again to make it work.<br>
$ sudo apt-get install emboss<br>
<br>
The original installation was apparently not found.<br>
<br>
Also: we required for perl two additional packages:<br>
perl-class-inspector and<br>
libfile-slurp-perl<br>
<br>
Thanks and regards,<br>
Joachim.<br>
<br>
</font><br>
On 20/05/10 13:00, <a class="moz-txt-link-abbreviated" href="mailto:bio-linux-dev-request@nebclists.nerc.ac.uk">bio-linux-dev-request@nebclists.nerc.ac.uk</a> wrote:
<blockquote
cite="mid:mailman.1.1274353201.15352.bio-linux-dev@nebclists.nerc.ac.uk"
type="cite">
<pre wrap="">Send Bio-Linux-dev mailing list submissions to
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or, via email, send a message with subject or body 'help' to
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Today's Topics:
1. Re: bio-linux-backups (Tony Travis)
----------------------------------------------------------------------
Message: 1
Date: Wed, 19 May 2010 15:22:41 +0100
From: Tony Travis <a class="moz-txt-link-rfc2396E" href="mailto:a.travis@abdn.ac.uk"><a.travis@abdn.ac.uk></a>
Subject: Re: [Bio-linux-dev] bio-linux-backups
To: <a class="moz-txt-link-abbreviated" href="mailto:bio-linux-dev@nebclists.nerc.ac.uk">bio-linux-dev@nebclists.nerc.ac.uk</a>
Message-ID: <a class="moz-txt-link-rfc2396E" href="mailto:4BF3F431.7050101@abdn.ac.uk"><4BF3F431.7050101@abdn.ac.uk></a>
Content-Type: text/plain; charset="iso-8859-1"; Format="flowed"
On 17/05/10 09:32, Tim Booth wrote:
</pre>
<blockquote type="cite">
<pre wrap="">Hi Tony,
Yes, I changed the setup script to run 'mkfs.ext4' instead of
'mkfs.ext3' as you suggested.
[...]
</pre>
</blockquote>
<pre wrap="">
Hello, Tim.
Although /backups itself is now on an ext4 filesystem, your "backup"
script" does not detect or dump Bio-Linux on ext4 filesystems ;-)
Attached is a patch to show the differences between your backup script
and mine: I have a configuration file in /etc/default, and use ETOH.
Bye,
Tony.
</pre>
</blockquote>
<br>
<div class="moz-signature">-- <br>
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<title></title>
<br>
<div class="moz-signature"><img alt="BITS logo"
src="cid:part1.03080207.04020708@vib.be" width="234" height="75"> <br>
<div class="moz-signature"><b><br>
<font color="#000000"><a href="http://be.linkedin.com/in/joachimjacob">Joachim
Jacob,
PhD.</a></font></b><br>
Bioinformatics Trainer<br>
BITS -
<a href="http://www.bits.vib.be/">www.bits.vib.be</a>
<br>
VIB -
<a href="http://www.vib.be/">www.vib.be</a><br>
<div class="moz-signature">
<p><font face="Arial">VIB headquarters, Rijvisschestraat 120, BE-9052
Gent, Belgium
(see
<a
href="http://maps.google.be/maps/ms?ie=UTF8&hl=nl&msa=0&msid=110984434447938768012.00047d0caa7a96a740597&ll=51.017345,3.707585&spn=0.022003,0.043731&t=h&z=15">map</a>)<br>
Tel.: +32 9 244 66 11 Fax.: +32 9 244 66 10 </font></p>
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