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Hello Bio-linux developers,<BR>
<BR>
I am trying to install Qiime and Denoiser on a fresh Ubuntu 10.04 LTS installation, but I am running in some issues.<BR>
<BR>
The bio-linux-denoiser package installs perfectly but conflicts with bio-linux-qiime. Besides that bio-linux-qiime depends on python-matplotlib, but a dependency for this package can not be installed (libgdk-pixbuf2.0-0). Is there way to solve these issues?<BR>
<BR>
<BR>
Installing bio-linux-qiime:
<PRE>
[145.100.30.212] out: The following packages have unmet dependencies:
[145.100.30.212] out: bio-linux-qiime: Depends: python-matplotlib but it is not going to be installed
[145.100.30.212] out: Conflicts: bio-linux-denoiser but 1:0.851-9 is to be installed
[145.100.30.212] out: E: Broken packages
</PRE>
<BR>
Adding python-matplotlib to the installation command:<BR>
<BR>
[145.100.30.212] out: The following packages have unmet dependencies:<BR>
[145.100.30.212] out: bio-linux-qiime: Conflicts: bio-linux-denoiser but 1:0.851-9 is to be installed<BR>
[145.100.30.212] out: python-matplotlib: Depends: libgdk-pixbuf2.0-0 (>= 2.22.0) but it is not installable<BR>
[145.100.30.212] out: E: Broken packages<BR>
<BR>
<BR>
Regarding the Denoiser, are there any plans to upgrade the package to the latest version (0.91). I am interested in that version because it supports titanium reads. More info: <A HREF="http://www.microbio.me/denoiser/">http://www.microbio.me/denoiser/</A><BR>
<BR>
Thanks for any help!<BR>
<BR>
Mattias<BR>
<BR>
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--
Bioinformatician
Netherlands Institute of Ecology (NIOO-KNAW)
Wageningen, the Netherlands
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