I'm pretty certain I'm on qiime1.5 , but my laptop is at home so cant check till tonight. I've finished the VM box upgrade now, from BL6 to BL7. I knew it was going to do the ubuntu upgrade first, just thought it was going to be in the shell and thought the gui was getting in the way, but no problems!<div>
<br></div><div>On the VM Qiime is 1.5, galaxy is going and I have a lovely grasshoper and biolinux logo. No issues in install other than qiime freaking out that my r-core was too new and it stopped the script. apt-get remove'd and then the script ran through to the end.</div>
<div><br></div><div>Do you plan to change around the unity hotlinks for the final distro? I imagine a folder of links to bioinformatics programs would be useful to new users, and unity is a bit annoying in the no hierarchical menus. Maybe as Galaxy is the flagship, pin that to the main menu, and drop ubuntuone etc</div>
<div><br></div><div>Dan</div><div><br><br><div class="gmail_quote">On 27 September 2012 12:03, Tim Booth <span dir="ltr"><<a href="mailto:tbooth@ceh.ac.uk" target="_blank">tbooth@ceh.ac.uk</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi Dan,<br>
<div class="im"><br>
On Thu, 2012-09-27 at 11:51 +0100, Daniel Pass wrote:<br>
> Currently I have only gone the route of Ubuntu12.04 into BL7 on my<br>
> laptop, but that seemed to work flawlessly although did need a couple<br>
> of re-runs. Qiime continues to work as before.<br>
><br>
</div>So you can confirm you now have Qiime 1.5, right?<br>
<div class="im">><br>
> Im running it on my virtual box now but keeping expectations low after<br>
> you said there were issues with it before, Tim. It won't let me run<br>
> the script straight, and keeps forcing the 'upgrade to 12.04' gui on<br>
> me so letting it do that first so assuming it'll go after that.<br>
><br>
</div>The script can't do its work until the base system is updated to Ubuntu<br>
12.04. This brings with it things like the kernel, Gnome, python, etc.<br>
This bit of the update is handled by the Ubuntu upgrade GUI.<br>
<br>
If you think you are already upgraded to 12.04 but you still get this<br>
situation then let me know.<br>
<br>
Cheers,<br>
<br>
TIM<br>
<div class="im HOEnZb">><br>
<br>
--<br>
Tim Booth <<a href="mailto:tbooth@ceh.ac.uk">tbooth@ceh.ac.uk</a>><br>
NERC Environmental Bioinformatics Centre<br>
<br>
Centre for Ecology and Hydrology<br>
Maclean Bldg, Benson Lane<br>
Crowmarsh Gifford<br>
Wallingford, England<br>
OX10 8BB<br>
<br>
<a href="http://nebc.nerc.ac.uk" target="_blank">http://nebc.nerc.ac.uk</a><br>
<a href="tel:%2B44%201491%2069%202705" value="+441491692705">+44 1491 69 2705</a><br>
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</div><div class="HOEnZb"><div class="h5">_______________________________________________<br>
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</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><br><br><br>Daniel Pass<br><br>Tel: (029208)76680<br>Mob: 07735658687<div><a href="http://www.kille-morgan.org.uk" target="_blank">http://www.kille-morgan.org.uk</a><br>
<br>Room 0.39,<br>School of Biosciences,<br>Biological Sciences Building,<br>Museum Avenue,<br>Cardiff,<br>CF10 3AT<br></div><br>
</div>